Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq93 163 6e-35
seq48 111 3e-19
seq2 100 6e-16
seq46 84.2 5e-11
>seq93
Length=1979483
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || |||| || | || || || ||||||||||| ||||
Sbjct 928050 ACCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGA 928109
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| || || ||||| || ||||| || |||| || || ||||| ||
Sbjct 928110 GAGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGG 928169
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||| ||||| ||||| | || ||| | || ||||| ||||||| || ||
Sbjct 928170 AATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCAC 928229
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct 928230 CTCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277
Score = 141 bits (156), Expect = 2e-28
Identities = 156/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || ||||| || | || ||| || |||||||||||||| |
Sbjct 928561 ACCACCACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGA 928620
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| |||||||| || || || ||||| |||||||| || || ||||| ||
Sbjct 928621 CAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGG 928680
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| ||||||||||| |||||| ||||| || || | ||||| ||||| || | ||||
Sbjct 928681 GATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGA 928739
Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075
| || || ||||| ||||| || ||
Sbjct 928740 CCTCAAGGGTGATGGTCTTGCCGGT 928764
Score = 127 bits (140), Expect = 4e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || |||| || | ||| || || |||||||||||||| |
Sbjct 927822 ACCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 927881
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| ||||| || || || || || || |||||||| | ||| || ||||| ||
Sbjct 927882 GAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 927941
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| || ||||| | || ||| | ||||| ||||| | ||| ||
Sbjct 927942 GATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCAC 928001
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||||||||| || || | ||||| || || || |||||
Sbjct 928002 CTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 125 bits (138), Expect = 1e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| | || ||||| | || || || || ||||||||||| |
Sbjct 928278 ACCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 928337
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| || |||| || || || || ||
Sbjct 928338 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGG 928397
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| || |||||||||| || ||| | || || ||||| || | || ||
Sbjct 928398 AATGCCCTCCTTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAAC 928457
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| || || ||||| || ||
Sbjct 928458 CTCGAGCGTAATGGTCTTGCCGGT 928481
>seq48
Length=384450
Score = 111 bits (122), Expect = 3e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || ||||| || | || || || |||||||||||||| |
Sbjct 121951 ACCACCACGGAGACGGAGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGA 122010
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| ||||| || || || ||||| | ||| || ||||| ||
Sbjct 122011 AAGGGTGCGACCATCCTCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 122070
Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015
||| ||||||||||| ||||||||
Sbjct 122071 AATGCCCTCCTTGTCCTGGATCTT 122094
>seq2
Length=1714173
Score = 100 bits (110), Expect = 6e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | || || || |||||||||||||| | |
Sbjct 409013 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 408954
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| |||
Sbjct 408953 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 408894
Query 282993 ATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 408893 ATGCCCTCCTTGTCT 408879
>seq46
Length=533260
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252
|||||| | ||||||| | || || ||| |||||||||| || | |||||| |
Sbjct 197469 GAGTTCCTCAGCGACGCGCTACCCTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGTGC 197528
Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312
|| || || || ||||| ||||||||| | | | || || || || || || ||
Sbjct 197529 CAGTACATTGAGTTCGTTGCTGATCGTTTGCTGCTCGCTCTGGGCAACACCAAGGTCTAC 197588
Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372
|| ||| |||||||| | || |||||| ||| || || || || || ||||||
Sbjct 197589 CACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTC 197648
Query 230373 TTCGAAAAGCGTGT 230386
||||| ||||||||
Sbjct 197649 TTCGAGAAGCGTGT 197662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737376056944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |