Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq93 134 3e-26 seq48 111 4e-19 >seq93 Length=1979483 Score = 134 bits (148), Expect = 3e-26 Identities = 156/208 (75%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || || || || || || || || |||||||| | ||||||||| ||| Sbjct 928046 CAAATCTTTGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC--- 927990 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| |||||||||||||| || || ||||| ||||||||| Sbjct 927989 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 927930 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || ||||| ||||| || |||| || | || || ||| Sbjct 927929 CAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGGACGCTCTCGGACTACAAC 927870 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTG 178128 |||| || || || || || || |||| Sbjct 927869 ATCCAGAAGGAGTCCACCCTCCA-CTTG 927843 Score = 134 bits (148), Expect = 3e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || ||| ||||||||||| || || || Sbjct 928766 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGA 928707 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || ||||| ||||||||||| || | ||||||||||| | Sbjct 928706 GCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCA 928647 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || || |||| || ||| |||| || |||||||| || | Sbjct 928646 AGCAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAATCAACTCTCC 928587 Query 178123 ATCTTGT 178129 | || || Sbjct 928586 ACCTGGT 928580 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || || || |||||||| || || |||||||| || |||||||| Sbjct 928483 TCACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACGTCAAGT 928424 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||| ||||| || || || || || ||||| ||||| || || || |||||||||| Sbjct 928423 CAAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAA 928364 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || || |||| || ||| | || || || || || |||| Sbjct 928363 AGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTGC 928304 Query 178123 ATCTTGTTTTG 178133 |||| || ||| Sbjct 928303 ATCTCGTCTTG 928293 Score = 114 bits (126), Expect = 3e-20 Identities = 149/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || ||||| || ||||| || |||||||| || || Sbjct 928274 CAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCGGAT 928215 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||| || || || || || || || |||||||| Sbjct 928214 ACTATTGACAACGTCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCAGCAG 928155 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| || || ||||| || | ||||| | ||||| ||| || Sbjct 928154 CGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAACATC 928095 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 928094 CAGAAGGAGTCGACTCTTCA-CTTG 928071 >seq48 Length=384450 Score = 111 bits (122), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| |||||||| || || || || ||||||||||| || || Sbjct 122109 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTC 122050 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| ||||| || ||||| ||||| | || ||| |||| || ||| |||| || Sbjct 122049 ATCTTCGCTGGAAAGCAACTCGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAG 121990 Query 178110 GAATCAACACTGCATCTTGTT 178130 || |||||||| || || ||| Sbjct 121989 GAGTCAACACTCCACCTGGTT 121969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729102498384