Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq93 152 5e-32
seq2 116 3e-21
>seq93
Length=1979483
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| |||||||| | ||||| || || ||| ||||||||| ||||| ||||| |||
Sbjct 927823 CCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 927882
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || |||||||| || || || || || ||||| ||||||| |||
Sbjct 927883 AGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 927942
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| | || | | ||| | | | ||||||||||| |||||
Sbjct 927943 ATACCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCAC 928001
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| ||| ||||| || || || || ||||| || || || |||||
Sbjct 928002 CTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 140 bits (154), Expect = 3e-28
Identities = 155/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || || || |||||||| || ||||||||||||||| ||||||||
Sbjct 928279 CCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 928338
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || |||||||| |||||||| ||||||||||| || |||| ||||
Sbjct 928339 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 928398
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| ||| ||| ||| | | | |||||| |||||| ||
Sbjct 928399 ATGCCCTCCTTATCCTGGATCTTTGACTT-GACGTTGTCAATGGTGTCGGACGACTCAAC 928457
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | ||| || || || || ||
Sbjct 928458 CTCGAGCGTAATGGTCTTGCCGGT 928481
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || ||||||||| ||||| || || |||
Sbjct 928051 CCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 928110
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || || ||||| |||||||| ||||||||||| ||||| | ||||
Sbjct 928111 AGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 928170
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| | | ||| | || | | ||| | | | ||| || ||||||||
Sbjct 928171 ATACCCTCCTTAT-CTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCAC 928229
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || |||| |||||| ||||| ||||||||
Sbjct 928230 CTCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277
Score = 114 bits (126), Expect = 1e-20
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || || |||||||| ||||| ||||||||
Sbjct 928562 CCACCACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 928621
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||||||||| |||| |||||| ||||||| |||
Sbjct 928622 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 928681
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786
| || |||||||||| ||| || |||||
Sbjct 928682 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCA 928712
>seq2
Length=1714173
Score = 116 bits (128), Expect = 3e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| ||||| ||
Sbjct 409013 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 408954
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| |||||||||||||||||||| || || ||||| ||||||| ||||
Sbjct 408953 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 408894
Query 41756 ACGCTCTCCTTGTC 41769
| || |||||||||
Sbjct 408893 ATGCCCTCCTTGTC 408880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303214083200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |