Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq308 159 4e-34 seq393 141 1e-28 seq92 138 1e-27 seq770 118 1e-21 >seq308 Length=368627 Score = 159 bits (176), Expect = 4e-34 Identities = 209/286 (73%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||||| | || ||| Sbjct 334950 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 334891 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 ||||| || | | | ||||||| | || | | | | |||||| ||| || Sbjct 334890 TCCAAAGATCTCCA-CGACTGGAACAACCGTCTCACTGCCGACGAGCAATTCTTCGTCTC 334832 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | ||||| || |||||||| || ||||||||||||||||| || || ||||| Sbjct 334831 TCACATCCTGGCTTTCTTCGCCGCGTCTGATGGCATCGTCAACGAGAACCTTGTTGAGCG 334772 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 |||| ||||| ||| | ||||||| || |||||||| ||||| |||||| || Sbjct 334771 TTTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTATGGCTTCCAGATCATGAT 334712 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || ||| ||||||||||| ||| Sbjct 334711 GGAGAATATCCACTCTGAGACCTACTCGCTGCTCATCGACACTTAC 334666 Score = 116 bits (128), Expect = 4e-21 Identities = 274/410 (67%), Gaps = 3/410 (1%) Strand=Plus/Minus Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 |||| | | ||||||| || || ||||| ||||||||||| ||||||| || | Sbjct 334505 CCTTTGCCCAGCGCCTCGTCGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCT 334446 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146 | || |||| || ||||||||||| || || || ||||| ||| |||| ||| ||||| Sbjct 334445 TTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTTATGCCTGGCTTGACCTTCTCCAACG 334386 Query 117147 AGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATT 117206 | || || || | || || ||||| || |||||| ||||| |||| | || Sbjct 334385 AACTGATTTCTCGCGATGAAGGTCTTCACACCGACTTCGCCTGCCTGCTCCACTCCCACC 334326 Query 117207 TGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCG 117266 || | || | ||| | | | | ||| ||| ||||||| || ||| |||| | Sbjct 334325 TGAAGGGCCGTGCCAGCAAGAAGATCATTCAGGACATCATCACCGATGCCGTCACCATTG 334266 Query 117267 AGCAGCGCTTCCTCACCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAACG 117325 || || |||||||| || || || || |||| ||||| || | || | ||| Sbjct 334265 AGAAGGAGTTCCTCACTGAGGCTCTCCCCTGTGC-CCTGCTCGGCATGAACTCCGACCTC 334207 Query 117326 ATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAG 117385 ||| ||| ||||| ||||| || || || | || ||| ||| || | | | ||| Sbjct 334206 ATGAAGCAGTACATTGAGTTTGTTGCTGATCGTCTTCTGGTCGCCCTCGGCAATGAGAAG 334147 Query 117386 CACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC-CTTGG 117434 |||||| | ||||||| | ||||| ||| | |||||| ||||| Sbjct 334146 GTCTACAAGTCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGG 334097 >seq393 Length=256169 Score = 141 bits (156), Expect = 1e-28 Identities = 165/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| | || || || | Sbjct 141479 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 141420 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||| ||| |||| Sbjct 141419 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 141361 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| |||||||||| ||| || || ||||| || || | || || || | |||||| Sbjct 141360 CCAGCAGCGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACTCTGAGCGACTA 141301 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||||||| ||| || || || ||| | ||| Sbjct 141300 CAACATCCAGAAGGAGAGCACTCTCCACCTGGTGCTCCGC 141261 >seq92 Length=346117 Score = 138 bits (152), Expect = 1e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| | || ||||| || | |||| | | Sbjct 146560 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATT 146619 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | || || |||||||||||| |||||||||| || || Sbjct 146620 GACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTG 146679 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | ||||||||| ||||||||||||||||||| Sbjct 146680 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 146739 Query 40879 G 40879 | Sbjct 146740 G 146740 >seq770 Length=520874 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || |||||| |||| || || | | Sbjct 200664 ATGCAGATCTTCGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCATCT 200723 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| ||||| |||||||| ||| | ||||| Sbjct 200724 GATACCATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 200782 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||||| || || | || ||||| |||||||| Sbjct 200783 GCAGCGTCTTATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCCTGTCTGACTACAA 200842 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || ||||| Sbjct 200843 CATCCAGAAGGAGTCAACCCTGCA 200866 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 ||||| || ||||||||| |||| || || | | || | | | | |||| | ||| Sbjct 200176 ACGGGAAAGACCATCACCCTCGAGGTGGAGTCATCGGATACCATCGACAACGTT-AAGTC 200234 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | || || |||||||| ||| ||||||| || || || |||| ||| || || Sbjct 200235 GAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTTATCTTCGCCGGAAA 200294 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | || |||||| |||||||||||||||||||||| | || || || Sbjct 200295 GCAGCTTGAGGATGGTCGTACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTTCA 200354 Query 40893 TCTAGT 40898 ||| || Sbjct 200355 TCTCGT 200360 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || || || ||| | || ||||| | | Sbjct 200892 ATGCAAATCTTCGTGAAGACCCTGACCGGAAAGACGATTACCCTTGAGGTCGAGTCATCT 200951 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || |||| ||||| ||||| || ||| | |||||| Sbjct 200952 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAG 201011 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || ||||| || |||| || || || ||| |||||| Sbjct 201012 CAGCGTCTTATCTTTGCTGGAAAGCAGCTAGAAGACGGCCGGACTCTGTCCGATTACAAC 201071 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| |||| || || Sbjct 201072 ATCCAGAAGGAATCCACCCTTCA 201094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213332941360