Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq148 111 3e-19 seq308 102 2e-16 seq107 96.9 7e-15 >seq148 Length=230242 Score = 111 bits (122), Expect = 3e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| ||||| || || ||||||| |||||||| || ||| Sbjct 155007 GGTGAGGATCTCTGCAACTGTACCTTCTCCCTTGCCTATGGTGCCAAGATTCTTCTCAAC 154948 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| |||| | ||||||||||| | || || ||||| ||| ||||| || | Sbjct 154947 CAGACCCACCTCCGCCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGCCCCAACGGTTCC 154888 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||||| ||||| ||||| |||| ||| | || || || ||||| ||| Sbjct 154887 GGAAAGTCTACTCTCATGCGTGCCATCAACAACGAGCAGGTCGAGGGTTTCCCTAA-GCA 154829 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 ||||| | ||| || | || ||||||||| | |||||| Sbjct 154828 GAGCGAGGTCAAGACTGTCTTCGTTGAGCACGACCTGGACTCC 154786 >seq308 Length=368627 Score = 102 bits (112), Expect = 2e-16 Identities = 291/445 (65%), Gaps = 12/445 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | |||||||| ||||||||||||||||||||| | Sbjct 334076 TCGAAGAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAT 334135 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTAC--GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||| || ||| || || || ||||| || || || |||||||| | Sbjct 334136 GACTTGTAGACCTTCTCATTGCCGAGGGCGACCAGAAGA--CGATCAGCAACAAACTCAA 334193 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGA 251740 ||||| ||| || || ||||||||||| | || ||| || | |||||| || Sbjct 334194 TGTACTGCTTCATGAGGTCGGAGTTCATGCCGAGCAGGGCACAGGGGAGAGCCTCAGTGA 334253 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGA 251796 ||| ||||| || ||| || || || | || ||| | | | | | | Sbjct 334254 GGAACTCCTTCTCAATGGTGACGGCATCGGTGATGATGTCCTGAATGATCTTCTTGCTGG 334313 Query 251797 GACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 || || || ||| | |||| || || | | || | ||| ||||| || Sbjct 334314 CACGGC----CCTTCAGGTGGGAGTGGAGCAGGCAGGCGAAGTCGGTGTGAAGACCTTCA 334369 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 |||||| || | |||||||| | || ||||||||| | ||||| ||| ||||| Sbjct 334370 TCGCGAGAAATCAGTTCGTTGGAGAAGGTCAAGCCAGGCATAAGACCACGCTTCTTGAGC 334429 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976 |||||||| | ||||| || ||| | | ||||||||| | | || || Sbjct 334430 CAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAAGCGACG 334489 Query 251977 AGGCGCTCAGCAAACGACTTGTCCT 252001 ||||||| ||||| ||| ||||| Sbjct 334490 AGGCGCTGGGCAAAGGACGAGTCCT 334514 >seq107 Length=734649 Score = 96.9 bits (106), Expect = 7e-15 Identities = 141/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754 ||| || || || || |||||||||||||||||| |||| || | || ||||| |||| Sbjct 276659 AGTTGGCTCCCTCTCTGGTGGTTGGAAGATGAAGTTGGCTCTGGCCCGAGCCATGCTACA 276718 Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814 ||| ||||||||||| || || || || || || ||||| | || ||||| | || Sbjct 276719 GCGCGCCGATGTCCTTCTCCTGGACGAACCTACTAACCATCTCGATGTTGCCAACATTGC 276778 Query 279815 CTGGCTAGTGTCCTACCT----AACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTC 279870 |||||| | | ||||| | ||| | | | | | ||| || ||||||| Sbjct 276779 CTGGCTGGAGAATTACCTCAAGACCCACCCCG----ACATCACCAGCCTGATCGTCTCTC 276834 Query 279871 ACGACTCTGGCTTCCTAGA 279889 |||||||||||||||| || Sbjct 276835 ACGACTCTGGCTTCCTCGA 276853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027824802896151