Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq308 116 9e-21 seq770 114 3e-20 seq393 114 3e-20 seq92 93.3 1e-13 seq752 84.2 5e-11 >seq308 Length=368627 Score = 116 bits (128), Expect = 9e-21 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172 || || |||||| | ||| ||| |||| ||| | || |||| ||||| |||| ||| Sbjct 334266 GAGAAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTCGGCATGAACTCCGACCTC 334207 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG--GCACTCGGTTATGAGA 269230 ||||| || || || || || || ||||||||| |||| | || ||||| |||||| Sbjct 334206 ATGAAGCAGTACATTGAGTTTGTTGCTGATCGT--CTTCTGGTCGCCCTCGGCAATGAGA 334149 Query 269231 AAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGA 269290 | || ||||| || || ||||||| ||| ||||| || || || | || |||| Sbjct 334148 AGGTCTACAAGTCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGA 334089 Query 269291 CGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATGAA 269342 | ||||||||||| |||||||| | ||||| || ||||||| |||| Sbjct 334088 CCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCCTGAA 334037 >seq770 Length=520874 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| |||| ||| || | || | || || || ||||| || ||||| | Sbjct 200890 CCACCGCGAAGTCGAAGAACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAC 200831 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| |||||||| |||||||| || |||||| Sbjct 200830 AGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGG---TCTGGG 200774 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || |||| || ||||| || || | ||| || || Sbjct 200773 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCC 200714 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 200713 ACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || || || ||||| || ||||||| | Sbjct 200378 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 200319 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| |||||||| || |||||||| || ||| Sbjct 200318 AGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGG---TCCGGG 200262 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| |||| || ||||| || || | ||| || || Sbjct 200261 GGAATGCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGATGACTCC 200202 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 || ||||| ||||| ||||| || |||| Sbjct 200201 ACCTCGAGGGTGATGGTCTTTCCCGTCA 200174 >seq393 Length=256169 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||||| || || ||||| || |||||| Sbjct 141250 CCACCACGGAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 141309 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||| || ||||| || || ||| Sbjct 141310 AGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGCTGG---TCCGGG 141366 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || | || ||||| || || | ||| || || Sbjct 141367 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCC 141426 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 141427 ACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 141476 >seq92 Length=346117 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || || || | || || || ||||||||| Sbjct 146738 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 146679 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || ||||||||||| || | || || || || Sbjct 146678 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCA 146619 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || || || ||||| ||||| Sbjct 146618 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 146560 >seq752 Length=317131 Score = 84.2 bits (92), Expect = 5e-11 Identities = 197/289 (68%), Gaps = 10/289 (3%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 ||||| ||||||||||| | ||||| | || | || || || | |||| || | Sbjct 298840 ACGATGGGCGTGATGAATTCGCGGAAGAAGTCGGGGACTTGGAGGAG-TGAGGGGAATTG 298782 Query 326024 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081 || |||| ||||| |||| |||||| || ||| |||| || |||| |||| Sbjct 298781 GACT-TGGAGGAAGTTGATGAGGAGACCTTTGATATGACTTCCATCGTGATCCTGATCGG 298723 Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCG-GTT 326140 ||||||||||| |||||| || | || ||||| |||| |||| | | | Sbjct 298722 CCATGATCATCAGATGACCATATCTGAGACTCTTGGTGTCCGTGTAGACTTGCTTGTGCT 298663 Query 326141 TGAAGGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCA 326198 ||| |||| |||| || |||| | |||||| | ||||| || || ||| | | Sbjct 298662 TGA-GGCCCAGAAACTGCTTGATGTTTTGGATTTCCTGATTCTTTGTTAT--TTGATCAA 298606 Query 326199 CGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC 326247 ||||||||||||||| || | | |||||||||||| ||||| || || Sbjct 298605 TGGATGCATCGCGGACATTGAGCATTTTTCCACGAAGTGGGAAAACACC 298557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179640630852658