Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq308 129 6e-25 seq393 107 2e-18 seq770 102 8e-17 >seq308 Length=368627 Score = 129 bits (142), Expect = 6e-25 Identities = 343/522 (66%), Gaps = 23/522 (4%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| |||| || |||||| | ||||| || ||||||||| || |||| | | Sbjct 334566 GTTCCCTGCATTCGAAAGAAGGCTGACTGGGCCATCAAGTGGATCCAG---GACAAGGAC 334510 Query 52386 ACGC---TGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 || | ||| ||||| | || || ||||| |||||||| | || || ||| Sbjct 334509 TCGTCCTTTGCCCAGCGCCTCGTCGCTTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGT 334450 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 |||||| ||||||| | | || | | || | ||||| ||| |||| ||| | Sbjct 334449 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTTATGCCTGGCTTGACCTTCTCC 334390 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 ||||| |||| || ||||| ||||| || ||||| ||||| || ||||| || | Sbjct 334389 AACGAACTGATTTCTCGCGATGAAGGTCTTCACACCGACTTCGCCTGCCTGCTCCACTCC 334330 Query 52557 TACAAGACGCGC-GTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGA 52615 || || | || ||| | | || | ||| || | | ||| ||| || Sbjct 334329 CACCTGAAGGGCCGTGCCAGCAAGAA--GATC--------ATTCAGGACATCATCACCGA 334280 Query 52616 GGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCAT 52675 || || | || || |||||||| | || | || || || | ||||| ||||| Sbjct 334279 TGCCGTCACCATTGAGAAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTCGGCAT 334220 Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 |||| | | |||| ||||||| |||||||| || |||||||| |||| || Sbjct 334219 GAACTCCGACCTCATGAAGCAGTACATTGAGTTTGTTGCTGATCGTCTTCTGGTCGCCCT 334160 Query 52736 CGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795 ||| | ||| || ||| | ||| || || || || ||| | ||||| || || Sbjct 334159 CGGCAATGAGAAGGTCTACAAGTCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCT 334100 Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || |||||||||||||| ||||||||||| || || || || Sbjct 334099 TGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 334058 >seq393 Length=256169 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| ||| || |||||||| || ||||| | | Sbjct 141285 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAA 141344 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 141345 GATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 141404 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||||||||| | || | ||| || || || || || || || Sbjct 141405 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 141464 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 141465 GAAGATCTGCAT 141476 >seq770 Length=520874 Score = 102 bits (112), Expect = 8e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| || || | | |||||||||| || ||||||||||| || ||||| ||||| Sbjct 200873 AACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCCTC 200814 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 || || || |||| |||| |||||||| ||||| || || || || || ||||| | Sbjct 200813 AAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-CT 200755 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 || | || | || | ||| || | ||| || | ||||||||||||| || | || Sbjct 200754 GAATCTTCGACTTGACGTTG-TCGATGGTATCAGATGACTCCACCTCGAGGGTGATAGTC 200696 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || || || || || |||||||| Sbjct 200695 TTACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256748811920