Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq393 113 4e-20 seq770 111 1e-19 seq92 86.0 6e-12 >seq393 Length=256169 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | || ||| || || || ||||| ||| Sbjct 141247 GCACCACCACGGAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 141306 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || || ||| || ||||| || |||||| |||| | ||||||||| || || Sbjct 141307 CTCAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCCGGG 141366 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || ||||||||||||||| ||| || ||||| |||| |||| |||||| | | ||| Sbjct 141367 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGGAAGACTC 141425 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | ||| || || || || || || || || |||||||| Sbjct 141426 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 141476 >seq770 Length=520874 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | ||| | ||||| || | || ||||| || || || ||||| || | Sbjct 200890 CCACCGCGAAGTCGAAGAACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAC 200831 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| ||| |||| | |||||||| || || || Sbjct 200830 AGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGA 200771 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || ||| ||||| |||| |||| ||| || | ||| || Sbjct 200770 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCGATGGTATCAGATGACTCCAC 200712 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || || || || || || || |||||||| Sbjct 200711 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || || || || ||||||||| || || || || ||| Sbjct 201100 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAGAGTCCGGCCGTCTTCT 201041 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| |||||||| |||| | |||||||| || || || || |||||||||||| Sbjct 201040 AGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 200981 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||| | | |||| ||| || | |||||| || | ||| | ||| || Sbjct 200980 ATCTTCGACTTCACATTGTCGATGGTATCAGATGACTCGACCTCAAGGGTAATCGTCTTT 200921 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || || || || ||||| Sbjct 200920 CCGGTCAGGGTCTTCACGAAGATTTGCAT 200892 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| || || ||| | ||||| ||| || ||||| || ||| Sbjct 200632 GTGGACTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 200573 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||| ||||| || || || || ||||||||||||||| ||| ||| |||| Sbjct 200572 GCAAAAATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 200513 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | | ||| || |||| ||| | || ||||| || || || Sbjct 200512 ACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTC 200453 Query 127097 TTTAC 127101 || || Sbjct 200452 TTGAC 200448 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| ||| | || ||| ||| || ||||| ||||| Sbjct 200348 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCAAGCTGCTTTCCG 200289 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| || || || || ||||||||||| ||| ||| ||| ||| Sbjct 200288 GCGAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTA 200229 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091 | |||| |||| ||| |||| ||| || |||| ||| | || || || |||| Sbjct 200228 ACGTTG-TCGATGGTATCCGATGACTCCACCTCGAGGGTGATGGTCTTTCCCGTCA 200174 >seq92 Length=346117 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| ||| || ||||| || |||||| ||||| Sbjct 146738 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 146679 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||| ||| ||| || ||||| | || Sbjct 146678 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCA 146619 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||||| |||||| || | ||| | || ||||| || || || || || ||| Sbjct 146618 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAA 146559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495385234640