Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq393 161 2e-34 seq770 132 1e-25 seq92 107 4e-18 seq910 89.7 1e-12 >seq393 Length=256169 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||| ||| || || || ||||| ||| ||||||| ||||| ||| Sbjct 141268 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCCTCG 141327 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| ||||| || ||||| || |||||||| || ||||| || Sbjct 141328 AGCTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 141387 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| ||| ||||| |||||||| | |||||| Sbjct 141388 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 141447 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 141448 CCCGTGAGGGTCTTGACGAAGATCTGCAT 141476 >seq770 Length=520874 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| | ||| | ||| || || ||||| || || || ||||| || | || || | Sbjct 200881 AGTCGAAGAACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGA 200822 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || ||||||||||| || || |||||||| |||||||| || Sbjct 200821 CCATCCTCAAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCC 200762 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| ||||| || ||||||||| || ||||| || || ||||| || ||||| Sbjct 200761 TTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGGGTG 200702 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | || || ||||| | ||||| Sbjct 200701 ATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Score = 131 bits (144), Expect = 4e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || || || ||||| |||| || || | ||||| || Sbjct 200360 ACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCA 200301 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || |||||||| || |||||||| || || || || Sbjct 200300 AGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGG 200241 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||| ||||| ||||| || ||||| | |||||| Sbjct 200240 ATCTTCGACTTAACGTTGTCGATGGTATCCGATGACTCCACCTCGAGGGTGATGGTCTTT 200181 Query 195112 CCTGTCA 195118 || |||| Sbjct 200180 CCCGTCA 200174 >seq92 Length=346117 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || || | ||||| || |||||||| || |||||||| Sbjct 146738 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 146679 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || || ||||| || || || || || || |||||| || ||| Sbjct 146678 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCA 146619 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||||||||| || || |||||||| | ||||| || || | || || ||||| Sbjct 146618 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 146560 >seq910 Length=567158 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/283 (67%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646 |||||| ||| | |||| ||||||| ||||||||| | || | | ||||| || | Sbjct 353968 TTTTCTTAGCCCTATGGATCCCCGATCTGTTCATGAAGCGTGTTGAGAAGAATGGCGACT 354027 Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706 ||| || | || ||||| ||| || || |||| || ||| || ||||| | Sbjct 354028 GGACTCTAATGTGCCCCAACGAATGCCCCGGTCTTGCCGACTGTTACGGCGAGGAGTTTG 354087 Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGG-AAGAGCCAAAAAGGTCGTGAAGGCCCAA 160765 || |||| || || || || || || | || ||| | | || | | |||||||||| Sbjct 354088 AGGCTCTGTACGAGAGTTATGAGAAGGCCGGCAAGGGTCGCAA-GACCATGAAGGCCCAG 354146 Query 160766 GAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATAC 160825 | |||||| | |||||| | || || ||| || | ||||| || ||| Sbjct 354147 AAGCTGTGGTACGCCATCCTCGAAGCTCAGACGGAGACTGGCAACCCCTTCATGCTGTAC 354206 Query 160826 AAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 ||||||||| | ||||||||| |||||||||||| | |||| Sbjct 354207 AAGGATGCCTGCAATCGCAAGAGCAACCAGAAGAACCTGGGAA 354249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109468649922737