Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq51 143 3e-28 seq910 131 2e-24 seq383 120 4e-21 seq308 120 4e-21 seq412 87.8 2e-11 seq218 87.8 2e-11 >seq51 Length=463109 Score = 143 bits (158), Expect = 3e-28 Identities = 97/109 (89%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| |||||||||||||||||||||| || || ||| |||| |||||| |||| || ||| Sbjct 1953 GCCTCCAACTACCTCGACATCAAGCCCCTTCTTGATGTTGGCTGCAAGACTGTCGCAAAC 2012 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct 2013 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGAAAGACCTTCAACATCA 2061 >seq910 Length=567158 Score = 131 bits (144), Expect = 2e-24 Identities = 296/447 (66%), Gaps = 15/447 (3%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || |||| || || || ||||||||||| | || || ||||| Sbjct 353849 CTGGTCGACGTATCGGGCAGTGTTATTGAACACACGGAGCATGGGAATGACACCATTGGA 353790 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || ||||| || || | ||| | ||| | || || | || ||| | ||| Sbjct 353789 GGTACCATTGGTACCGGCAATGTAAGAGCCAGTAGCACGAATTCGATGAGCGTTGAGGCC 353730 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||||| ||| ||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 353729 AATGCCGCCAGCCATCTTGGAGATCATAGCACAGGTCTTGAGAGTGTCATAGATACCCTC 353670 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||| |||||||||| || || ||||| || || || || || | || || Sbjct 353669 GATGCTGTCCTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGGGGCTGAGGTGTACC 353610 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| |||| | |||||| || ||| || Sbjct 353609 AGCGTTGAAAAGAGTAGGAGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTTGTAAGT 353550 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || || ||| || | || | || || || ||||| | || Sbjct 353549 CTCCAGGACACGC------------TCAATGTTGTCA---CCCCAGATGCCGACAGACAC 353505 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| ||| ||||||||||||| ||| | |||| ||||| || Sbjct 353504 ACGCATGATCATGTGCTGCGGCCGCTCGACGATCTTGCCATCAATCTTGAGGAGGTATGA 353445 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTA 1630511 || || ||| ||| ||||||||| Sbjct 353444 TCGCTCCAGAGTCTTGAAGCCAAAGTA 353418 Score = 100 bits (110), Expect = 3e-15 Identities = 138/189 (73%), Gaps = 8/189 (4%) Strand=Plus/Minus Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393 ||||||| || || ||||| | || || || ||| |||||||||| |||| | Sbjct 354903 GGTTGACGACCTGGAACTCGCCAGCCAGTACACGACGCTGGTAGATGTTGGAGGTGTAGG 354844 Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 |||| | |||| ||||||| ||||||||||| || |||| ||||||||| | || Sbjct 354843 GCTCGAAGCACTCGTTGTTGCCTAGGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGC-- 354786 Query 1627454 CGAGGAGCGAG---TTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCAGCGCGTCCCAG 1627509 ||||||| || |||||||||||||||| | || || || | || || | |||||| Sbjct 354785 -GAGGAGCAAGCTGTTGCGCAGGCCGTGCTCCTTGACCT-GCTCACGGAGTGTCTCCCAG 354728 Query 1627510 TCCCAGCGG 1627518 |||||| || Sbjct 354727 TCCCAGAGG 354719 >seq383 Length=275768 Score = 120 bits (132), Expect = 4e-21 Identities = 268/396 (68%), Gaps = 15/396 (4%) Strand=Plus/Minus Query 18100 GGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCA 18159 |||||||| | ||| | |||| |||||||||||| | ||||| || | Sbjct 104287 GGCGAGTCCCGCGGCAAGTCCGTCTCGTGCATCATCGACAACTGTCCGCCTAATCTGGCC 104228 Query 18160 CTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTT 18219 || |||| ||||| |||||||| ||| | | || || | || |||| || | Sbjct 104227 CTCACCGAAGCCGATATCCAGCCCCAGCTCAACCGTCGAGG-CCAATCCAG----CA-TC 104174 Query 18220 TCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTC 18279 |||| || |||||||| || ||||||| |||||| || ||||| || || ||| || Sbjct 104173 ACCACTCCCCGCAACGAAAAAGAACGCGTCACCATCCATTCCGGCACCGAAAAGGGCATC 104114 Query 18280 ACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTAT 18339 || |||||| | || || |||| || ||||| |||||||| ||| ||||| Sbjct 104113 AC-CTCGGCACCCCGATCCTCCTCACCGTCCCCAACGAGGACCAGCGTCCCAAGGACTAC 104055 Query 18340 TCCGACATGTGCAAGG-----TGCCGCGGCCCTCA--CACGCCGACTACACCTACATGGC 18392 ||||| | || | | || | |||| || || ||||||| || ||| | | Sbjct 104054 GGCGACAAGACCATCGACCTCTACCCCCGCCC-CAGCCATGCCGACTGGACGTACCTCGA 103996 Query 18393 CAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCAT 18452 ||||||||| ||||||| || || || ||||| ||| ||||||||| | Sbjct 103995 AAAGTACGGCGTCAAGGCTAGCTCTGGTGGCGGCCGCAGCAGTGCTCGCGAGACCATTGC 103936 Query 18453 GCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCT 18488 ||||||||||||||||| ||||| ||||| ||||| Sbjct 103935 CCGCGTCGCCGCCGGCGCTGTCGCTGAGAAGTGGCT 103900 Score = 93.3 bits (102), Expect = 5e-13 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 19037 GCGCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAG 19095 ||| ||||| | ||||| ||||| | ||||| ||| | ||||||| || | | Sbjct 103690 GCGACAAGAACGGCAGCACTGGCGGATCTGTGACTTGCATCATCCGCAACGCTCCCGTCG 103631 Query 19096 GCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGA 19155 |||| |||||||| ||||| |||||| ||||||| ||||||||||||||||| |||| Sbjct 103630 GCCTAGGCGAGCCATGCTTCGACAAGCTCGAGGCTCTTCTCGCCCACGCCATGCTCTCGA 103571 Query 19156 TCCCGGCCACCAAGGGATTCGAGATTGG 19183 ||| || ||||| || ||||||| Sbjct 103570 ACCCCGCTGTCAAGGCTTTTAAGATTGG 103543 >seq308 Length=368627 Score = 120 bits (132), Expect = 4e-21 Identities = 148/197 (75%), Gaps = 13/197 (7%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 |||||| |||||| |||| ||||||| |||| | ||| ||||| || || ||||| Sbjct 334363 ACCTTCATCGCGAGAAATCAGTTCGTTGGAGAAGGTCAAGCCAGGCATAAGACCACGCTT 334422 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCA 869296 ||||||||| |||||| | || || || ||| ||| ||||| ||||||||||| || Sbjct 334423 CTTGAGCCAGAAGATG--GAAGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCG 334480 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATC 869353 || ||| ||| |||| ||||||| | |||| |||||| | ||||||||| || Sbjct 334481 AAAGCGACGAGGCGCTGGGCAAAG--GACGAG----TCCTTGTCCTGGATCCACTTGATG 334534 Query 869354 GCCCAGTCGGCCTTTTT 869370 |||||||| ||||| || Sbjct 334535 GCCCAGTCAGCCTTCTT 334551 Score = 113 bits (124), Expect = 6e-19 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 334049 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGAGAGATG 334108 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| || ||||| | | Sbjct 334109 TTCTCCATGAAGTCGAAGGGGTTGGATGACTTGTAGACCTTCTCATTGCCGAGGGCGACC 334168 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || || || || |||||||| |||||||| ||||||| ||| ||||||||||| Sbjct 334169 AGAAGACGATCAGCAACAAACTCAATGTACTGCTTCATGAGGTCGGAGTTCATGCCGAGC 334228 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| | | ||||| ||||| || |||||| ||| |||| Sbjct 334229 AGGGCACAGGGGAGAGCCTCAGTGAGGAACTCCTTCTCAATGGTGACGGCATCGGTGATG 334288 Query 868931 AT 868932 || Sbjct 334289 AT 334290 >seq412 Length=1354298 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 18358 CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCG 18417 ||||| ||||| |||||||||| || ||| | | ||||| || | ||||| || || Sbjct 1104340 CCGCGCCCCTCCCACGCCGACTGGACTTACCTTGAGAAGTATGGTACTAAGGCCTCCTCT 1104281 Query 18418 GGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCC 18477 ||||| |||||| ||||| ||||| | ||||||||||||||||| || ||| Sbjct 1104280 GGCGGCGGCCGGAGCAGCGCCCGTGAGACTATTGCCCGCGTCGCCGCCGGCGCTGTTGCC 1104221 Query 18478 GAGAAATGGCT 18488 ||||| ||||| Sbjct 1104220 GAGAAGTGGCT 1104210 Score = 86.0 bits (94), Expect = 8e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 ||||||||||||||||||||||| ||| | ||||| ||||||||||| || |||| Sbjct 1103917 GGCCTCGGCGAGCCGTGCTTTGATAAGCTTGAGGCTCTCCTCGCCCACGCTATTATGTCT 1103858 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGC 19184 || || || || ||||| || ||||||||| Sbjct 1103857 ATTCCTGCTACTAAGGGCTTTGAGATTGGC 1103828 >seq218 Length=563217 Score = 87.8 bits (96), Expect = 2e-11 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 ||||| || ||||| || ||| ||||||||||||||||||||||| || | || || | Sbjct 263892 CTGCCCCCAGGACGACAAAAGTTGATCATCCTCGACGAGGCCGACAGCATGACATCTGGT 263833 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || ||||| ||||| || || ||||||| | |||| || || | || || | Sbjct 263832 GCACAGCAAGCCCTCCGACGAACTATGGAAATCTATTCCAATACCACCAGATTCGCATTC 263773 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTC--GCTGCGCCATTCTGC 1574235 || |||||| ||| | |||||||| |||| | |||| | |||||||| |||| Sbjct 263772 GCCTGCAACCAGTCCAACAAAATCATCGAGCCCCT--ACAGTCGAGATGCGCCATCCTGC 263715 Query 1574236 G 1574236 | Sbjct 263714 G 263714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107064439073787