Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq910 237 2e-57 seq752 156 5e-33 seq308 120 3e-22 >seq910 Length=567158 Score = 237 bits (262), Expect = 2e-57 Identities = 489/716 (68%), Gaps = 20/716 (3%) Strand=Plus/Plus Query 53233 GCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAAC 53292 |||||||| ||||| ||| || | ||| | |||| ||| || || || | || || Sbjct 353537 GCGTGTCCTGGAGACTTACAACCTCATGTCCAGCAAGTTCTTCACTCATGCTTCTCCTAC 353596 Query 53293 CCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAA 53352 || |||||||||||||| ||| || ||| |||| |||||||||||| | ||||| Sbjct 353597 TCTTTTCAACGCTGGTACACCTCAGCCCCAGCTGTCTTCCTGCTTCCTGGTTGACATGAA 353656 Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412 ||| ||| ||||| || ||||| || || |||||| ||||| ||||||||| Sbjct 353657 GGAGGACAGCATCGAGGGTATCTATGACACTCTCAAGACCTGTGCTATGATCTCCAAGAT 353716 Query 53413 GTCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAG 53470 | | || || || || || || |||| | || | ||||| | ||| | || Sbjct 353717 GGCTGGCGGCATTGGCCTCAAC-GCTC-ATCGAATTCGTGCTACTGGCTCTTACATTGCC 353774 Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 || || || || | || |||| || | || |||||||| || ||||| ||||| ||| Sbjct 353775 GGTACCAATGGTACCTCCAATGGTGTCATTCCCATGCTCCGTGTGTTCAATAACACTGCC 353834 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || |||||| |||||||||| ||||| || | |||||||||||||||||||| Sbjct 353835 CGATACGTCGACCAGGGTGGCAACAAGCGGCCTGGTGCTTTCGCCATCTACCTCGAGCCC 353894 Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 |||||||| ||| | | ||||| || || || || || || || | |||||| | Sbjct 353895 TGGCACGCGGACGTCTTTGAGTTCCTTGATCTACGCAAAAACCACGGCAAGGAAGAGGTT 353954 Query 53651 CGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAG 53710 ||| ||| || || || ||| || ||||| || || || |||||| | || ||| Sbjct 353955 CGCGCCCGCGATCTTTTCTTAGCCCTATGGATCCCCGATCTGTTCATGAAGCGTGTTGAG 354014 Query 53711 AAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGG-CCTCCAGGGTGTCTA 53769 ||| | | || ||| || |||||||| ||||| |||||||| | | | | ||| || Sbjct 354015 AAGAATGGCGACTGGACTCTAATGTGCCCCAACGAATGCCCCGGTCTTGCCGACTGT-TA 354073 Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----- 53824 ||| ||||||||| | | |||| || || | || | ||||| |||| Sbjct 354074 CGGCGAGGAGTTTGAGGCTCTGTACGAGAGTTATG-AG---AAGGCCG--GCAAGGGTCG 354127 Query 53825 -AAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGG 53882 |||| | ||||| | || | ||| | || |||||| | ||| ||| |||||| | Sbjct 354128 CAAGACCATGAAGGCCCAGAAGCTGTGGTACGCCATCCTCGA-AGCTCAGACGGAGACTG 354186 Query 53883 GAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | | || | |||| ||||||||| | ||| |||||||||||||||||| Sbjct 354187 GCAACCCCTTCATGCTGTACAAGGATGCCTGCAATCGCAAGAGCAACCAGAAGAAC 354242 >seq752 Length=317131 Score = 156 bits (172), Expect = 5e-33 Identities = 218/304 (72%), Gaps = 4/304 (1%) Strand=Plus/Minus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 ||||||||||| | ||||||| || || |||||| ||| || |||||||| | |||| Sbjct 299521 AGGCGAGTGAAGGTATAACGAGGACTGGCGGCATCCGAGCCGCCGGCAAGACGAGAACCG 299462 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | ||||| ||||| | ||| | |||||| | ||| |||||||||||||| ||| Sbjct 299461 AAGTTACCACTTGGCTCTAGACAGTTGATGTTGTTTGAGCCGACAAAGTTTTGAGCTAAG 299402 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || || || || ||||| ||||| || ||||| ||||| | ||| Sbjct 299401 CCAATGATTGTTTGCTGAAGAGATGCTTCACCGTGGTGGTATGCCGTTTGCTCGGAAACG 299342 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| | | |||||||| | || |||| || ||| |||||| ||||||| Sbjct 299341 TAACCAGCCAATTCAACCACCTTCTTATCCTTGAC--AAGATTCCTCTTGAAACAGGCAT 299284 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGA 117596 | || |||||||| || | || || |||||||| || |||||| |||||| || Sbjct 299283 AGATTACCTTGCGTTGGCCAGGTTTTAGACCATCAAGCATAGAAGGGATGGAACGCATGT 299224 Query 117597 TGTC 117600 |||| Sbjct 299223 TGTC 299220 Score = 120 bits (132), Expect = 3e-22 Identities = 206/299 (69%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || |||||| | || || | ||||| |||||| ||| || || || || | || || Sbjct 299518 CGAGTGAAGGTATAACGAGGACTGGCGGCATCCGAGCCGCCGGCAAGACGAGAACCGAAG 299459 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | ||| ||||| || ||||| |||||| | ||| || || || ||||| || Sbjct 299458 TTACCACTTGGCTCTAGACAGTTGATGTTGTTTGAGCCGACAAAGTTTTGAGCTAAGCCA 299399 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || ||| ||| |||||||||||||| || ||||| ||||| | | ||| Sbjct 299398 ATGATTGTTTGCTGAAGAGATGCTTCACCGTGGTGGTATGCCGTTTGCTCGGAAACGTAA 299339 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||| | |||||||| | ||| | || ||| |||||| |||||| || || Sbjct 299338 CCAGCCAATTCAACCACCTTCTTATCCTTGACAAGATTCCTCTTGAAACAGGCATAGATT 299279 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 |||||||| ||| ||||| | ||| || | || ||| || |||||| || |||| Sbjct 299278 ACCTTGCGTTGGCCAGGTTTTAGACCATCAAGCATAGAAGGGATGGAACGCATGTTGTC 299220 >seq308 Length=368627 Score = 120 bits (132), Expect = 3e-22 Identities = 309/460 (67%), Gaps = 28/460 (6%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| || ||||| || || ||||||||||| || | | |||||||||||||| Sbjct 334058 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCCATG 334117 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTG-CCATGAGG 74579 ||||||| ||||| || ||| | |||||| | | | | ||| || Sbjct 334118 AAGTCGAAGGGGTTGGATGACTTGTAGAC---CTTCTCATTGCCGAGGGCGACCAGAAGA 334174 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 ||||| || ||||| | |||||||||| |||| | | | |||||||| || Sbjct 334175 CGATCAGCAACAAACTCAATGTACTGCTTCATGAGGTCGGAGTTCATGCCGAGCAGGGCA 334234 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697 || || || ||||| |||| ||||| |||| | | | | ||| || | || | Sbjct 334235 CAGGGGAGAGCCTCAGTGAGGAACTCCTTCTCAA--TGGTGACGGCATCGGTGATGATGT 334292 Query 74698 TGTGAATG----TCTT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACG 74750 |||||| |||| ||| | ||| ||| |||||| |||| ||| | || | Sbjct 334293 CCTGAATGATCTTCTTGCTGGCACGGCCCTT------CAGGTGGGAGTGGAGCAGGCA-G 334345 Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808 || || || | || || |||||||| | |||| ||| || || || | | || Sbjct 334346 GCGAAGTC--GGTGTGAAGACCTTCATCGCGAGAAATCAGTTCGTTGGAGAAGGTCAAGC 334403 Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868 |||||||||| ||||||||||| | ||| ||||||| | |||| ||| |||||||||| Sbjct 334404 CAGGCATAAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGA 334463 Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 | || ||||| || || ||||| ||||| || || || Sbjct 334464 TACCCTCGACGGCAGCGAAAGCGACGAGGCGCTGGGCAAA 334503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209768577800