Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq770 165 2e-35 seq393 158 3e-33 seq92 129 1e-24 >seq770 Length=520874 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || || | ||| || || ||||| || |||||||| || || | ||||| Sbjct 200884 CGAAGTCGAAGAACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTA 200825 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || |||||||| || ||||||||||| || || ||||| || |||| || Sbjct 200824 CGACCATCCTCAAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCC 200765 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| || ||||| |||||||| ||||| || |||||||| Sbjct 200764 TCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGG 200705 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 200704 GTGATAGTCTTACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||| || || |||||||| || | ||||| | ||||| Sbjct 200647 AGGACGAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGGCCATCC 200588 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || ||||| |||||||| || |||| || ||||||||| Sbjct 200587 TCAAGCTGCTTGCCAGCAAAAATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 200528 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||||||||| || |||||||| ||||| ||| Sbjct 200527 TGGATCTTCGACTTGACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTC 200468 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 200467 TTGCCAGTGAGGGTCTTGAC 200448 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | |||||| ||||| || || |||||||| ||||| | || || Sbjct 201113 ACGAAGACGAAGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAGAGT 201054 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || || ||||| |||||||| || || |||||||| || || ||||| || |||| || Sbjct 201053 CCGGCCGTCTTCTAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACC 200994 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| ||||| || |||||||| ||||| || ||||| || Sbjct 200993 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCAGATGACTCGACCTCAAG 200934 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| || || ||||| || || | ||||| Sbjct 200933 GGTAATCGTCTTTCCGGTCAGGGTCTTCACGAAGATTTGCAT 200892 Score = 159 bits (176), Expect = 8e-34 Identities = 148/188 (79%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || ||||| || ||||| || |||||||| || || | ||||| | ||||| Sbjct 200363 AGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCC 200304 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||||||||| |||||||| || |||| || ||||| ||| Sbjct 200303 TCAAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCC 200244 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || || || |||||||| ||||| ||| Sbjct 200243 TGGATCTTCGACTTAACGTTGTCGATGGTATCCGATGACTCCACCTCGAGGGTGATGGTC 200184 Query 211083 TTTCCCGT 211090 |||||||| Sbjct 200183 TTTCCCGT 200176 >seq393 Length=256169 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| |||||| ||| || |||||||| || || || || | ||||| Sbjct 141265 AGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCC 141324 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || || ||||| || |||| || ||||||||| Sbjct 141325 TCGAGCTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 141384 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||||||| Sbjct 141385 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 141444 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 141445 TTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 141479 >seq92 Length=346117 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| || ||||||||||| |||||||| Sbjct 146738 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 146679 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||| ||||||||||| || || || || Sbjct 146678 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCA 146619 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 146618 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 146560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159138470160515