Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq393 96.9 3e-15 seq770 89.7 4e-13 >seq393 Length=256169 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || |||||||| || || || || || ||| || ||||| | Sbjct 141261 GCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCC 141320 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| || || || || || || ||||||||||| | ||| | || ||| || Sbjct 141321 ATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTT 141380 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || |||| ||| | | | || ||| |||||||| || | |||| Sbjct 141381 GTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGA 141439 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || ||||| || || || || ||||| |||||||| Sbjct 141440 TCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 141479 >seq770 Length=520874 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| || || || || || ||||||| || || || |||| || Sbjct 201100 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAGAGTCCGGCCGTCTTCT 201041 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| ||||||||||||||||| | ||| | | ||| |||||| Sbjct 201040 AGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 200981 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| || | | | | ||||| ||||| || || | || || | ||| Sbjct 200980 ATCTTCGACTTCACATTGTCGATGGTATCAGATGACTCGACCTCAAGGGTAATCGTCTTT 200921 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || || ||||||||||| Sbjct 200920 CCGGTCAGGGTCTTCACGAAGATTTGCAT 200892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || || | || || || | || ||| Sbjct 200872 ACCAAGTGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCCTCA 200813 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || || || ||||||||||||||||| | ||| | || ||| |||||| Sbjct 200812 AGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 200753 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || ||| |||| ||| | | | ||||| |||||||| || | |||||| | || Sbjct 200752 ATCTTCGACTTGA-CGTTGTCGATGGTATCAGATGACTCCACCTCGAGGGTGATAGTCTT 200694 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| ||||| Sbjct 200693 ACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540830835743