Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq393 118 2e-21 seq770 114 3e-20 seq92 102 2e-16 >seq393 Length=256169 Score = 118 bits (130), Expect = 2e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || ||||| ||| || ||||||||||| ||| | ||||| Sbjct 141258 GAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTTCG 141317 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| || | ||||||||||| | || || || Sbjct 141318 GCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTC 141377 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| ||| ||| || ||||| || Sbjct 141378 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 141437 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 || || || |||||||| ||||| ||||||| |||||| || || Sbjct 141438 GATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCC 141482 >seq770 Length=520874 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||||| || || || || |||||||||||||||| | ||| | || ||| Sbjct 201103 AGGACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAGAGTCCGGCCGTCT 201044 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||||| ||||| || || |||||||| | ||||||||| | | || || ||||| | Sbjct 201043 TCTAGCTGCTTT--CCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGT 200986 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || ||| | || | | | || || ||| || ||||| ||||| | Sbjct 200985 CCTGAATCTTCGACTTCACATTGTCGATGGTATCAGATGACTCGACCTCAAGGGTAATCG 200926 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||||||||||| ||||| Sbjct 200925 TCTTTCCGGTCAGGGTCTTCACGAAGATTTGCAT 200892 Score = 104 bits (114), Expect = 5e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || | ||||| || | Sbjct 200870 CAAG-TGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCCTCAA 200812 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| |||||||||||||| | ||||||||| | | || || ||||| || || Sbjct 200811 GCTGCTTT--CCGGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 200754 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || ||||| | || | | | || || ||| || || || || ||||| || Sbjct 200753 AATCTTCGACTTGACGTTGTCGATGGTATCAGATGACTCCACCTCGAGGGTGATAGTCTT 200694 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||||| |||||| Sbjct 200693 ACCAGTGAGGGTCTTGACGAAGATCTGCAT 200664 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| |||||||| |||||||| || ||||||||||| |||| | || | Sbjct 200370 GAGGCGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACG 200311 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| |||||||||||||| | ||| ||||||| | || || Sbjct 200310 ACCATCCTCAAGCTGCTTT--CCGGCGAAGATAAGGCGCTGTTGGTCCGGGGGAATGCCC 200253 Query 152004 TCCTTTTCTTGAATTTT 152020 ||||| || || || || Sbjct 200252 TCCTTATCCTGGATCTT 200236 >seq92 Length=346117 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| |||| | || | ||||| || || || || |||||||| Sbjct 146738 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 146679 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | ||| || ||||| || || || || |||||| | || Sbjct 146678 AGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCA 146619 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 | | |||| || ||| || ||||| || || || ||||||||||| ||||||||||| Sbjct 146618 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 146560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153807332387281