Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylonectria_20macrodidyma_20[genbank_20GCA_5F000935225.1_202015- 03-02] 911 sequences; 57,996,413 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq770 159 8e-34 seq393 150 4e-31 seq92 131 4e-25 >seq770 Length=520874 Score = 159 bits (176), Expect = 8e-34 Identities = 161/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||||||||||||||| || || Sbjct 200667 CAGATCTTCGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCATCTGAT 200726 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 200727 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 200786 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||||||||| ||||| || ||||| | || || | || || ||| || Sbjct 200787 CGTCTTATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCCTGTCTGACTACAACATC 200846 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || ||||| ||||| |||| || Sbjct 200847 CAGAAGGAGTCAACCCTGCA-CTTGGTT 200873 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || ||||| ||||| ||||| ||||| || || || Sbjct 200895 CAAATCTTCGTGAAGACCCTGACCGGAAAGACGATTACCCTTGAGGTCGAGTCATCTGAT 200954 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || || || || || |||||||| Sbjct 200955 ACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAG 201014 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| ||||| ||||| || ||||||| ||||||| ||| || Sbjct 201015 CGTCTTATCTTTGCTGGAAAGCAGCTAGAAGACGGCCGGACTCTGTCCGATTACAACATC 201074 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 201075 CAGAAGGAATCCACCCTTCA-CTTG 201098 Score = 136 bits (150), Expect = 1e-26 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || ||||||||||||||||| || || |||||||| ||||| || Sbjct 200176 ACGGGAAAGACCATCACCCTCGAGGTGGAGTCATCGGATACCATCGACAACGTTAAGTCG 200235 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || || || || || |||||||| || || ||||||||||||||||| Sbjct 200236 AAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTTATCTTCGCCGGAAAG 200295 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | || || |||| || ||| |||| || || || || || ||| Sbjct 200296 CAGCTTGAGGATGGTCGTACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTTCAT 200355 Query 178125 CTTGT 178129 || || Sbjct 200356 CTCGT 200360 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || ||||||||||||||||| || |||||||||| Sbjct 200446 TCGTCAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCTTCTGACACCATCG 200505 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| |||||||| || || || || |||||||| || || || | Sbjct 200506 ACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGA 200565 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | || || || || ||||| || ||||| | || || |||| |||||| | || || | Sbjct 200566 TTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTATAACATTCAGAAGG 200625 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || ||||| || Sbjct 200626 AGTCCACCCTCCATCTCGT 200644 >seq393 Length=256169 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 141473 CAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 141414 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || ||||||||||| Sbjct 141413 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 141354 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| || || |||||||| ||||| | ||||| ||| || ||| || Sbjct 141353 CGACTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACTCTGAGCGACTACAACATC 141294 Query 178104 CAAAAAGA 178111 || || || Sbjct 141293 CAGAAGGA 141286 >seq92 Length=346117 Score = 131 bits (144), Expect = 4e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || ||||| || || || |||||||| ||||| || ||| |||||||| Sbjct 146559 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCAT 146618 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || || ||||| ||||| ||||| || || || ||||| ||||||||||| || || Sbjct 146619 TGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGCGTCT 146678 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| || || ||||| || ||||| | || || |||| || ||| |||| || Sbjct 146679 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 146738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203717149823734