Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 98.7 8e-16
seq315 84.2 2e-11
>seq1817
Length=26529
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | ||| || | ||| | || || ||||| || ||||| |||||
Sbjct 16809 TTCCACCACGTAGTCGGAGAACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGC 16750
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| || |||| |||||||| || |||||| | ||||||| ||| || || ||
Sbjct 16749 TGAGAGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGG 16690
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| ||||| | ||| || || | |||
Sbjct 16689 GAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCAA 16630
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||| || || || ||||| || |||||
Sbjct 16629 CCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581
>seq315
Length=5603
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/225 (68%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | || |||||||| || ||||| ||||| |
Sbjct 1075 CCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 1134
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || ||||||| ||||| || || || | || || | ||| ||||| |||
Sbjct 1135 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 1194
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | ||| || || | ||||
Sbjct 1195 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 1254
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAA--TATTT 21171
|| | ||| ||||||||||| || | || || || || |||||
Sbjct 1255 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGCTATTT 1299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422249195623904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |