Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq600 127 2e-24
seq315 123 2e-23
seq1817 118 8e-22
>seq600
Length=9993
Score = 127 bits (140), Expect = 2e-24
Identities = 156/212 (74%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| |||||||||||| || ||| | || || || ||
Sbjct 637 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTCGAGCTG 696
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| || || |||||||||||||| || | |||||||||||| ||| ||
Sbjct 697 CTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTT 756
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | | ||||||||| | ||| || ||||| |||||
Sbjct 757 CGACTTGACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGT 816
Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343
|| ||||| || || || |||||| ||||||
Sbjct 817 GAGGGTCTTGACGAAAATCTGCATGATTGCCT 848
>seq315
Length=5603
Score = 123 bits (136), Expect = 2e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||||||| || || |||| ||
Sbjct 1093 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 1152
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| |||| |||||||||||||| || | |||||||||||||
Sbjct 1153 AGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGG 1212
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || ||||||
Sbjct 1213 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTG 1272
Query 45308 CCCGTCAGAGTCTTCACAAAG 45328
|||||||| |||||||| |||
Sbjct 1273 CCCGTCAGGGTCTTCACGAAG 1293
>seq1817
Length=26529
Score = 118 bits (130), Expect = 8e-22
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||||| |||||||||||| |||| |||| | || || |||||
Sbjct 16265 GTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTG 16206
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||| ||||| ||||| ||||| ||||| ||||| | || ||||| ||| ||| ||
Sbjct 16205 CTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTT 16146
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
|| || | | | |||| ||||||||| | ||| || |||||||| ||
Sbjct 16145 GGATTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 16086
Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340
|| ||||| || ||||| |||||||||
Sbjct 16085 GAGGGTCTTGACGAAGATCTGCATGTTG 16058
Score = 104 bits (114), Expect = 2e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||||||| || || | || || || || || ||||||||
Sbjct 16544 CTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAA 16485
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||| ||||||||||||||||| | |||||||||||| || || ||||||
Sbjct 16484 AATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTAACGTT 16425
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | ||||| | ||||||||| | ||| || ||||| || || || ||||| ||
Sbjct 16424 GTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTGAC 16365
Score = 102 bits (112), Expect = 6e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||||||| ||||||||| |||||||||||| | || |||| | || |||
Sbjct 17017 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCCTCC 16958
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || ||||| || | || |||||||| || || | || |||||||||
Sbjct 16957 AACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 16898
Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|| || ||| | || | || | ||||| || ||||||| || ||||||||
Sbjct 16897 ATCTTGCTCTTGA-CGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTCTT 16839
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| || ||||| |||||
Sbjct 16838 TCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395065839680824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |