Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1817 82.4 6e-11 >seq1817 Length=26529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || ||||||| || || | || || || ||||| || || |||||||||||| Sbjct 16808 TCCACCACGTAGTCGGAGAACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGCT 16749 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | ||||||| || || |||||| ||||||||| |||||||| ||| Sbjct 16748 GAGAGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGGG 16689 Query 18218 CACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | || ||||| || || ||| | ||| || | | | ||||| | ||| Sbjct 16688 AATACCCTCCTTGTCCTGGATCTTGCT-CTTCACATTATCGATGGTGTCTGACGACTCAA 16630 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | ||||||||||| || || ||||| || ||||| Sbjct 16629 CCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379335012392280