Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 118 9e-22
seq1817 111 1e-19
>seq1257
Length=2089
Score = 118 bits (130), Expect = 9e-22
Identities = 238/349 (68%), Gaps = 8/349 (2%)
Strand=Plus/Plus
Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|||| || || || | || || || || || || ||||| ||||| ||||| |||
Sbjct 485 CCACTTTTGCTCAGCGTCTTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGGCG 544
Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077
|| || | || || ||| ||||||| || || ||||||||||| || || || ||
Sbjct 545 CATTCGCCTCCATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCA 604
Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137
||||| | || || || ||||||||||| || ||||| || || |||||| || || |
Sbjct 605 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTA--CTATTCAC 662
Query 58138 ACATTGTCAATAAACCGACGCG----GGATCGCATCTTGGACATTATCACCGAGGCGGTC 58193
||| |||| ||||| | || ||| |||| | | || ||||| || || |||
Sbjct 663 ACA-CCTCAA-GAACCGCCCCGGCAAGGACGTCATCCAGAAGATCATCACAGATGCTGTC 720
Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253
|| |||||| | || || | || || || || || || |||| || ||||||
Sbjct 721 GCCATCGAACAAGAATTCCTGACTGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCC 780
Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302
| |||||| | ||||| ||||| || |||||| | || || |||
Sbjct 781 AACTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCG 829
>seq1817
Length=26529
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|||||||| || ||||| ||||| || || ||||| || |||||| | || || || |
Sbjct 16059 AACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCC 16118
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | |||||| | || ||| ||||||||| | || || |||
Sbjct 16119 TCCGACACCATCGACAACGTCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGAC 16178
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| | || |||||||| || || | || || | ||| ||||||| ||
Sbjct 16179 CAGCAGCGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGCGACTAC 16238
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || || ||||| || || || || || |||
Sbjct 16239 AACATCCAGAAGGAATCCACCCTCCACCTCGTCCTT 16274
Score = 111 bits (122), Expect = 1e-19
Identities = 156/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||||| || |||||||| | || |||||| | ||
Sbjct 16809 ATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATCG 16868
Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309
|||| | || | ||||| ||| || | | ||||||||||||| | || || |||
Sbjct 16869 GACACGATTGACAACGTCAA---GAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 16925
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || || || || |||||||| || |||||||| || | ||| | ||||| ||
Sbjct 16926 CAACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTAC 16985
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || || || ||||| || || |||| |||
Sbjct 16986 AACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTT 17021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445755567876480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |