Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 143 5e-29
seq274 122 2e-22
>seq1257
Length=2089
Score = 143 bits (158), Expect = 5e-29
Identities = 317/473 (67%), Gaps = 7/473 (1%)
Strand=Plus/Plus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|| ||||||||||||| || || || |||||||| ||||| |||||||| ||||||||||
Sbjct 503 TTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGGCGCATTCGCCTCCATTTTCT 562
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | ||||| | ||| | |||| ||||| |||| |||||| ||| |||| ||| | |
Sbjct 563 GGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTG 622
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA--TAC 102093
|||| ||||| || ||||| || ||| | || || | | | | || |
Sbjct 623 ACGAGGGTCTGCACACTGACTTCGCTTGCCTACTATTCACACA----CCTCAAGAACCGC 678
Query 102094 CCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
||| |||| || || | | || |||| || || ||| || |||||||||||
Sbjct 679 CCCGGCAAG-GACGTCATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAAGAATT 737
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|| || | | ||||| | | |||| |||||| ||| ||||||| || ||
Sbjct 738 CCTGACTGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCCAACTTGATGAAGCAATA 797
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273
||| || || || || || ||| |||| | | || || ||| |||
Sbjct 798 CATCGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATC 857
Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333
||||||||||||| |||||||| || || ||||| | ||||||||||| || ||
Sbjct 858 TACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGA 917
Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386
||| | |||| || || || ||| ||||||||| | ||| ||||
Sbjct 918 GAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATGGCTAGCACCAAGAAGA 970
>seq274
Length=11782
Score = 122 bits (134), Expect = 2e-22
Identities = 419/646 (65%), Gaps = 22/646 (3%)
Strand=Plus/Plus
Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458
||||| |||||||| ||||||||||| || | ||| || || || | ||| |||| |||
Sbjct 2983 CCTTCTGCCTCATACTTCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGA 3042
Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515
|| |||||||| |||||||| |||| ||| || || |||| || | || |
Sbjct 3043 CCCGGGCACTCACTAGGGCACATGAGGGTCCA---CTCGCCGTTCTTCTCAACACGCTTC 3099
Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTA 94575
||||| || |||| | ||||| ||| |||||||||| | | | | ||||| |||
Sbjct 3100 ATGAAAAGGTCAGGAATCCAGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTA 3159
Query 94576 CCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCA--ATCAGAAATAT 94633
|| ||||| | ||||| || || || ||| | ||||| | || ||||
Sbjct 3160 CCATGGTTCTTGCGAAGGTCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAT 3219
Query 94634 AGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGT 94693
|| || || || |||||||| || |||||| ||| | | | | | | ||
Sbjct 3220 --ATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGT 3277
Query 94694 TAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTC--CATGACGA--AATG 94749
| || | | | | | | || || |||| ||||||| || | ||| |||
Sbjct 3278 TGAAAACTCGCAACATGGGCACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATG 3337
Query 94750 GGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAG 94809
| || | || | | || | || || |||| |||||||| |||||||||
Sbjct 3338 AG----CCAGTAGCACGGATCCGGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAG 3393
Query 94810 ATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCC 94869
|| || || ||| || || || || ||||||||||| || || || | | | |
Sbjct 3394 ATCATGGCACAGGTCTTGAGTGTGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCA 3453
Query 94870 AGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAA 94929
| | |||||| |||| || || | | ||||||| ||| || || |||||||||
Sbjct 3454 ACTAAGAAGCAGGAGGCCAGCTGTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAA 3513
Query 94930 GCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCT 94989
|| ||||| ||||| | || ||||| || | || || | |||||| || | |
Sbjct 3514 GCGTGGGTGAAATATTTGCTGGACATAAGGTTGTAAGTCTGAATGAC--TTTCTCTACAT 3571
Query 94990 GAT--CCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGG 95033
|| || ||| || |||||||||||||| ||||||| ||| ||
Sbjct 3572 TATCGCCCCAAATACCAACAGCCACACGCATGATCATGTGCTGTGG 3617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989559351936520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |