Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1257 143 5e-29 seq274 122 2e-22 >seq1257 Length=2089 Score = 143 bits (158), Expect = 5e-29 Identities = 317/473 (67%), Gaps = 7/473 (1%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 || ||||||||||||| || || || |||||||| ||||| |||||||| |||||||||| Sbjct 503 TTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGGCGCATTCGCCTCCATTTTCT 562 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || | ||||| | ||| | |||| ||||| |||| |||||| ||| |||| ||| | | Sbjct 563 GGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTG 622 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGA--TAC 102093 |||| ||||| || ||||| || ||| | || || | | | | || | Sbjct 623 ACGAGGGTCTGCACACTGACTTCGCTTGCCTACTATTCACACA----CCTCAAGAACCGC 678 Query 102094 CCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153 ||| |||| || || | | || |||| || || ||| || ||||||||||| Sbjct 679 CCCGGCAAG-GACGTCATCCAGAAGATCATCACAGATGCTGTCGCCATCGAACAAGAATT 737 Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213 || || | | ||||| | | |||| |||||| ||| ||||||| || || Sbjct 738 CCTGACTGAGGCTCTGCCCTGTGCTCTGCTGGGCATGAACGCCAACTTGATGAAGCAATA 797 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273 ||| || || || || || ||| |||| | | || || ||| ||| Sbjct 798 CATCGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTCGGCAACGAGAAGGTCTACCGATC 857 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 ||||||||||||| |||||||| || || ||||| | ||||||||||| || || Sbjct 858 TACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGA 917 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386 ||| | |||| || || || ||| ||||||||| | ||| |||| Sbjct 918 GAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATGGCTAGCACCAAGAAGA 970 >seq274 Length=11782 Score = 122 bits (134), Expect = 2e-22 Identities = 419/646 (65%), Gaps = 22/646 (3%) Strand=Plus/Plus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 ||||| |||||||| ||||||||||| || | ||| || || || | ||| |||| ||| Sbjct 2983 CCTTCTGCCTCATACTTCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGA 3042 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515 || |||||||| |||||||| |||| ||| || || |||| || | || | Sbjct 3043 CCCGGGCACTCACTAGGGCACATGAGGGTCCA---CTCGCCGTTCTTCTCAACACGCTTC 3099 Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTA 94575 ||||| || |||| | ||||| ||| |||||||||| | | | | ||||| ||| Sbjct 3100 ATGAAAAGGTCAGGAATCCAGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTA 3159 Query 94576 CCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCA--ATCAGAAATAT 94633 || ||||| | ||||| || || || ||| | ||||| | || |||| Sbjct 3160 CCATGGTTCTTGCGAAGGTCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATAT 3219 Query 94634 AGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGT 94693 || || || || |||||||| || |||||| ||| | | | | | | || Sbjct 3220 --ATAGCAAAGGCACCGGGCCTCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGT 3277 Query 94694 TAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTC--CATGACGA--AATG 94749 | || | | | | | | || || |||| ||||||| || | ||| ||| Sbjct 3278 TGAAAACTCGCAACATGGGCACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATG 3337 Query 94750 GGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAG 94809 | || | || | | || | || || |||| |||||||| ||||||||| Sbjct 3338 AG----CCAGTAGCACGGATCCGGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAG 3393 Query 94810 ATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCC 94869 || || || ||| || || || || ||||||||||| || || || | | | | Sbjct 3394 ATCATGGCACAGGTCTTGAGTGTGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCA 3453 Query 94870 AGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAA 94929 | | |||||| |||| || || | | ||||||| ||| || || ||||||||| Sbjct 3454 ACTAAGAAGCAGGAGGCCAGCTGTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAA 3513 Query 94930 GCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCT 94989 || ||||| ||||| | || ||||| || | || || | |||||| || | | Sbjct 3514 GCGTGGGTGAAATATTTGCTGGACATAAGGTTGTAAGTCTGAATGAC--TTTCTCTACAT 3571 Query 94990 GAT--CCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGG 95033 || || ||| || |||||||||||||| ||||||| ||| || Sbjct 3572 TATCGCCCCAAATACCAACAGCCACACGCATGATCATGTGCTGTGG 3617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989559351936520