Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq274 226 4e-54
seq1257 123 3e-23
>seq274
Length=11782
Score = 226 bits (250), Expect = 4e-54
Identities = 750/1156 (65%), Gaps = 34/1156 (3%)
Strand=Plus/Plus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||| |||| || || ||||||||||||| | | ||| || | || ||||||
Sbjct 2767 GCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCA 2826
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| | ||| || |||||||| | || | ||||| ||||| ||| ||
Sbjct 2827 GTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAG 2886
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||| ||||| ||||| ||| | || || || |||||| || | ||| || | |
Sbjct 2887 TGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTAC 2946
Query 63123 CAGACGACTC-GAGCCTTTA--TTATAG--ATTTGTATCTCCTTTCTCTTTCGTATAGAG 63177
|| | | || | ||||| | || | | | | || || ||| | | | | |
Sbjct 2947 CATA-GTTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCG-- 3003
Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237
||||| ||| || || || || | |||| | | | | || || ||| || |
Sbjct 3004 --TACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGC 3061
Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297
|||| | | |||||| |||| | || || || ||||| || || ||||||||||| |
Sbjct 3062 ACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGA 3121
Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
|||| | || ||||| | | | ||| || || || ||||| ||| || |
Sbjct 3122 GAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAA 3181
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
||||| | | | ||| ||||| ||||| | ||||| || | | || |||| |
Sbjct 3182 GGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCT 3241
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
|||| || ||||| || | |||||| |||||||| || |||||| |||||| || | |
Sbjct 3242 TGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGA 3301
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA 63537
|||| || || ||||||| ||||||| ||| || ||| | ||||| || |
Sbjct 3302 TACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGAT----CCGG 3357
Query 63538 TTGAT----AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593
| ||| ||||| || || || || | || ||||| | || || || | |||
Sbjct 3358 TGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTG 3417
Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653
|| ||||| || || || || || || |||||| || || || ||| | || | |
Sbjct 3418 TCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT-G 3476
Query 63654 TGAC-GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63712
|| | | | ||||| ||||| || | || || |||||||| || || |||| ||
Sbjct 3477 TGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGA 3536
Query 63713 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTAC 63766
| || ||||| |||| ||| || |||| || |||| ||| || ||
Sbjct 3537 CATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCA------AATACCAAC 3590
Query 63767 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAA 63826
|| |||||||| | ||||||||| || ||||| ||||| || | || | |||| |
Sbjct 3591 AGCCACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAG 3650
Query 63827 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63886
||| || | ||||| || || || ||||| || | ||| |||||||| ||||| |
Sbjct 3651 GTAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGAC 3710
Query 63887 AATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAA 63945
||| | || | || | || || | | | | || | || | | | ||| || |
Sbjct 3711 AATTGCGGAGTCGAAGTCCTCTTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTAGAGA 3769
Query 63946 TAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTT 64005
| || ||||| | ||| || ||||| || ||||||| | | | || || ||
Sbjct 3770 TCATAGGAGAGGGCTTCATGTTCTTAGGGTTGACATAGTGGTAAAGGTCGCTAATGACAG 3829
Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065
| || | || ||||||| |||||| || ||||| | ||| || | ||||| || |
Sbjct 3830 AAGACCATTGCTTCTTTGTTTGCTTGTGGAGGTTTGACACGGCAATACGTGCGGCAAGGA 3889
Query 64066 TGGCATAATCCGGATG 64081
| ||||||||||| ||
Sbjct 3890 TAGCATAATCCGGGTG 3905
>seq1257
Length=2089
Score = 123 bits (136), Expect = 3e-23
Identities = 335/507 (66%), Gaps = 17/507 (3%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|| ||||| ||||| ||||| || ||||| || || || || || | | || || ||
Sbjct 941 TTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTC 882
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| || || || |||||| ||| | || | || | || | |
Sbjct 881 TCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGTTGCCGAG---AGCGACC 825
Query 33411 AAT---CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATG 33467
| | | || |||||||| || || ||| ||||||| | ||||| || |
Sbjct 824 AGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGC 765
Query 33468 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATA 33527
|| | || |||||| |||| || ||||||||||| |||| || |||| ||| ||
Sbjct 764 AGAGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGATG 705
Query 33528 ATAAATCTA----ACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACA 33583
|| ||| ||| | ||| | || || | | | ||| | || | | ||
Sbjct 704 ATCT-TCTGGATGACG--TCCTTGCCGGGGCGGTTCTTG-AGGTGTGTGAATAGTAGGCA 649
Query 33584 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCC 33643
||||| || ||||||||||||||| | | || | ||||| || || || || ||
Sbjct 648 AGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACC 589
Query 33644 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGAT 33703
|||||| || |||||||| || | ||| || ||||| ||||||| || ||||||||
Sbjct 588 GGGCATCAGACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGAT 529
Query 33704 TCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTAT 33760
|| || || ||||||||||||||||| | || || || || | ||||| ||
Sbjct 528 ACCCTCGACAGCAGCAAAGGCAATAAGACGCTGAGCAAAAGTGGAGTTCTTGTCAGAGAT 469
Query 33761 CCACTTTTGAGCCCAATCGGCCTTCTT 33787
||| | ||||||| |||||||||||
Sbjct 468 CCATTGCAGAGCCCAGTCGGCCTTCTT 442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629802295432320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |