Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq274 241 2e-58
seq1257 105 9e-18
>seq274
Length=11782
Score = 241 bits (266), Expect = 2e-58
Identities = 753/1156 (65%), Gaps = 34/1156 (3%)
Strand=Plus/Plus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795
|||| ||| |||| || || ||||||||||||| | | ||| || | || ||||||
Sbjct 2767 GCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCA 2826
Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855
||||| | ||| || || ||||| | || | ||||| ||||| ||| ||
Sbjct 2827 GTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAG 2886
Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915
|||||| ||||| ||||| ||| | || || || |||||| || | ||| || | |
Sbjct 2887 TGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTAC 2946
Query 65916 CAGACGACTC-GAGCCTTTA--TTATAG--ATTTGTATCTCTTTTCTCTTTCGTATAGTG 65970
|| | | || | ||||| | || | | | | || | ||| | | | | ||
Sbjct 2947 CATA-GTTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGT- 3004
Query 65971 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 66030
|||| ||| || || || || | |||| | | | || || || ||| || |
Sbjct 3005 ---ACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGC 3061
Query 66031 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 66090
|||| | | |||||| |||| | || || || ||||| || || ||||||||||| |
Sbjct 3062 ACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGA 3121
Query 66091 GAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 66150
|||| | || | ||| | | | ||| || || || ||||| ||| || |
Sbjct 3122 GAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAA 3181
Query 66151 GGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 66210
||||| | | | ||| | ||||| ||||| | ||||| || | | || |||| |
Sbjct 3182 GGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCT 3241
Query 66211 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 66270
|||| || ||||| || | |||||| |||||||| || |||||| |||||| || | |
Sbjct 3242 TGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGA 3301
Query 66271 TACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAA 66330
||||||| || |||||||| || |||| ||| || ||| | ||||| || |
Sbjct 3302 TACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGAT----CCGG 3357
Query 66331 TTGAT----AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386
| ||| ||||| || || || || | || ||||| | || || || | ||
Sbjct 3358 TGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTG 3417
Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446
|| ||||| ||||| ||||| || ||| |||||| || || || ||| | || ||
Sbjct 3418 TCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCTG- 3476
Query 66447 TGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 66505
|| | | ||||| ||||| || | || || |||||||| || || |||| ||
Sbjct 3477 TGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGA 3536
Query 66506 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTAC 66559
| || ||||| |||| ||| || |||| || |||| ||| || ||
Sbjct 3537 CATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCA------AATACCAAC 3590
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619
|| |||||||| | ||||||||| || ||||| || ||||| | || | |||| |
Sbjct 3591 AGCCACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAG 3650
Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679
||| || | ||||| || || || ||||| || | ||| |||||||| ||||| |
Sbjct 3651 GTAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGAC 3710
Query 66680 AATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAA 66738
||| | |||| || | || || | | | | || |||| | | | ||| || |
Sbjct 3711 AATTGCGGAGTCGAAGTCCTCTTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTAGAGA 3769
Query 66739 TAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTT 66798
| || ||||| | ||| || ||||| |||||||||| | | | || || ||
Sbjct 3770 TCATAGGAGAGGGCTTCATGTTCTTAGGGTTGACATAGTGGTAAAGGTCGCTAATGACAG 3829
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
| || | || ||||||| ||||| || ||||| ||||| || | ||||| | |
Sbjct 3830 AAGACCATTGCTTCTTTGTTTGCTTGTGGAGGTTTGACACGGCAATACGTGCGGCAAGGA 3889
Query 66859 TGGCATAATCCGGATG 66874
| ||||||||||| ||
Sbjct 3890 TAGCATAATCCGGGTG 3905
Score = 86.0 bits (94), Expect = 8e-12
Identities = 318/496 (64%), Gaps = 7/496 (1%)
Strand=Plus/Plus
Query 64869 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 64928
||||| ||||||||||| || ||||| ||||| || |||| ||| |||||||| ||
Sbjct 1891 GTACGGAGATAGTACATGCCAGTTTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTG 1950
Query 64929 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 64988
|| | || | | || ||| ||||| || || | ||||| ||||||||
Sbjct 1951 GTAATCTTCCCCATAGTGGGCTCTCTCATATGAATGTTTAGTGATTGGGATTGATCGACA 2010
Query 64989 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 65048
||||| || | ||| || ||||| | | ||| || || | |||||||||| ||
Sbjct 2011 AAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTC 2070
Query 65049 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 65105
|| |||| || | || | |||| ||||| | |||||||| || ||||| ||
Sbjct 2071 TTGTAAAGAGCTTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCG 2130
Query 65106 GCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 65165
|| || || | ||||| || ||| ||| | | || | | | ||
Sbjct 2131 GCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGC 2190
Query 65166 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 65225
| || ||||| ||||| || || |||| | || | |||| |||||| ||
Sbjct 2191 AACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGAT 2250
Query 65226 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 65285
|| || || || | | || || || |||| ||| || | ||| ||||| ||||||
Sbjct 2251 GTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATA 2310
Query 65286 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTT--CTGATTTTATCTTTTAGAGGTT 65343
|| || || || || || |||| | ||| ||||| |||||| || || ||
Sbjct 2311 GGAGCAACTAACAAGCTGTTTCGTACACC--ATGTTGCTTGATTTGCTCCTTAAGGCTAG 2368
Query 65344 CCCAATTCCAAAGATC 65359
|||||| ||| |||||
Sbjct 2369 CCCAATCCCAGAGATC 2384
>seq1257
Length=2089
Score = 105 bits (116), Expect = 9e-18
Identities = 149/209 (71%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| ||||| || ||| ||||||||||| | | || | |||||||| || || ||
Sbjct 650 CAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 591
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|||||||| || |||||||| || | ||| || ||||| || |||| ||| |||||
Sbjct 590 CCGGGCATCAGACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAG 531
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334
|| || || || || |||||||||||||| | || || || || |||||
Sbjct 530 ATACCCTCGACAGCAGCAAAGGCAATAAGACGCTGAGCAAAAGTGGAGTTCTTGTCAGAG 471
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363
||||| | ||||||| |||||||||||
Sbjct 470 ATCCATTGCAGAGCCCAGTCGGCCTTCTT 442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658156806400960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |