Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 95.1 1e-14
>seq1817
Length=26529
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || |||| ||| | || | ||| | || || || || || ||||| || |||||
Sbjct 16289 GCCACCACGTAGACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCT 16230
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| || || || || || ||||| | |||| || ||||| || |||||
Sbjct 16229 CAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGG 16170
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCA 139715
|||||||| || || ||| | || | ||| | | || | ||||||| || |||||
Sbjct 16169 AATGCCTTCCTTATCC-TGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAGGACTCCA 16111
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||| ||| | |||||||| || | || || ||||| || |||||
Sbjct 16110 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 16062
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
||||| || || || ||||| || ||||| | || | |||||| ||||| |||||
Sbjct 16777 GTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTCCAGCTGCTTACCC 16718
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || || || |||||||| || || || || ||||| ||| || ||
Sbjct 16717 GCAAAGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTC 16658
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| | | ||| ||||| | ||| | |||||||||||||| ||
Sbjct 16657 ACATTATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTC 16598
Query 139748 TTTACGAATATTTGCATA 139765
|| || || || ||||||
Sbjct 16597 TTCACAAAGATCTGCATA 16580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496051945644800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |