Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq274 235 8e-57 seq1257 129 8e-25 >seq274 Length=11782 Score = 235 bits (260), Expect = 8e-57 Identities = 755/1159 (65%), Gaps = 32/1159 (3%) Strand=Plus/Plus Query 79611 CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 79670 || ||| | ||| |||| || || ||||||||||||| | | ||| || | || || Sbjct 2763 CAGCGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAAT 2822 Query 79671 TTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 79730 |||||||| | |||| || ||| ||||| | || | ||||| ||||| ||| Sbjct 2823 CTCAGTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTT 2882 Query 79731 ACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 79790 || |||||| ||||| ||||| ||| | || || || |||||| || | ||| || Sbjct 2883 GCAGTGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGC 2942 Query 79791 TTTCCAGACGACTC-GAGCCTTTA--TTATAG--ACTTGTATCTCTTTTCTCTTTCGTAT 79845 | ||| | | || | ||||| | || | | || | || | ||| | | | | Sbjct 2943 GTACCATA-GTTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCT 3001 Query 79846 TGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCA 79905 || | || ||| || || || || | |||||| | | || || || || | Sbjct 3002 CGT----ACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTA 3057 Query 79906 GGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATC 79965 || ||||| | | |||||| || | | || || || ||||| || || ||||||||| Sbjct 3058 GGGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATC 3117 Query 79966 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 80025 || ||||| | || ||||| | | | || || || || ||||| ||| Sbjct 3118 CAGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGG 3177 Query 80026 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGT 80085 || |||||| | | | ||| ||||| ||||| | ||||| || | | || || Sbjct 3178 TCAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGC 3237 Query 80086 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 80145 | ||||| || ||||| || | |||||| |||||||| || |||||| |||||| || Sbjct 3238 CTCTTGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGC 3297 Query 80146 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 80205 | |||||||| || |||||||| || |||| ||| || ||| | ||||| || Sbjct 3298 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGAT---- 3353 Query 80206 CTAATTGAT----AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261 | | ||| ||||| || || || || | || ||||| | || || || | Sbjct 3354 CCGGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAG 3413 Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321 || || ||||| ||||| || || || || |||||| || || || ||| | || Sbjct 3414 TGTGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAG 3473 Query 80322 TTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 80380 | ||| | | ||||| ||||| || | || || |||||||| || || |||| Sbjct 3474 CT-GTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGC 3532 Query 80381 CAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG-----AATTCC 80435 |||| || ||||| |||| ||| || |||| || |||| | ||| || Sbjct 3533 TGGACATAAGGTTGTAAGTCTGAATGACT--TTCTCTA---CATTATCGCCCCAAATACC 3587 Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495 || || |||||||| | ||||||||| || ||||| || ||||| | ||| | |||| Sbjct 3588 AACAGCCACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAG 3647 Query 80496 CAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 80555 | |||||| | ||||| || || || ||||| || | ||| |||||||| ||||| Sbjct 3648 TAGGTAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTA 3707 Query 80556 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-G 80614 | ||| | |||| || | || || | | | | || |||| | | | ||| | Sbjct 3708 GACAATTGCGGAGTCGAAGTCCTCTTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTAG 3766 Query 80615 AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCA 80674 | || || ||||| | ||| || ||||| || ||||||| | | | || || | Sbjct 3767 AGATCATAGGAGAGGGCTTCATGTTCTTAGGGTTGACATAGTGGTAAAGGTCGCTAATGA 3826 Query 80675 CTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTA 80734 | | || | || ||||||| |||||| || ||||| ||||| || | ||||| | Sbjct 3827 CAGAAGACCATTGCTTCTTTGTTTGCTTGTGGAGGTTTGACACGGCAATACGTGCGGCAA 3886 Query 80735 AAATGGCATAATCTGGATG 80753 || |||||||| || || Sbjct 3887 GGATAGCATAATCCGGGTG 3905 Score = 113 bits (124), Expect = 6e-20 Identities = 345/533 (65%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 ||||| ||||||||||| || ||||| ||||| || |||| ||| ||||||||| || Sbjct 1891 GTACGGAGATAGTACATGCCAGTTTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTG 1950 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || | || | | || ||| ||||| || || | ||||| |||||||| Sbjct 1951 GTAATCTTCCCCATAGTGGGCTCTCTCATATGAATGTTTAGTGATTGGGATTGATCGACA 2010 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 ||||| || | ||| || ||||| | | ||| || || | |||||||||| || Sbjct 2011 AAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGTC 2070 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 78984 || |||| || | || | |||| ||||| | |||||||| || ||||| || Sbjct 2071 TTGTAAAGAGCTTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTCG 2130 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044 || || || | ||||| || ||| ||| | | || | | | || Sbjct 2131 GCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAGC 2190 Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 | || ||||| ||||| || || |||| | || | |||| |||||| || Sbjct 2191 AACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGAT 2250 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 || || || || | |||| || || |||| ||| || | ||| || || |||||| Sbjct 2251 GTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCATA 2310 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCC 79224 || || || || || || |||| | ||| | | |||||| || || || || Sbjct 2311 GGAGCAACTAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGCC 2370 Query 79225 CAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACC 79277 |||||||| |||||| ||| |||||||| | || |||||||| ||||| Sbjct 2371 CAATCCCAGAGATCACTGGGGGTGACATTCCACATGTCGTATTGTAGGATACC 2423 >seq1257 Length=2089 Score = 129 bits (142), Expect = 8e-25 Identities = 222/318 (70%), Gaps = 11/318 (3%) Strand=Plus/Minus Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 || |||||| |||| || ||||||||||| |||| || |||||||| || || ||| Sbjct 755 GGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGATGATCT-TCTG 697 Query 49915 ----ACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 ||| | ||| | || || | | | ||| | || | | || ||||| || Sbjct 696 GATGACG--TCCTTGCCGGGGCGGTT-CTTGAGGTGTGTGAATAGTAGGCAAGCGAAGTC 640 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 ||||||||||||||| | | || || |||||||| || || || |||||||| || Sbjct 639 AGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAG 580 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 |||||||| || | ||| || ||||| || |||| ||| |||||||| || || || Sbjct 579 ACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGAC 520 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACTTTTG 50147 || |||||||||| ||| | || || || ||| | ||||| ||||| | | Sbjct 519 AGCAGCAAAGGCAATAAGACGCTGAGCAAAAGTGGAGTTCTTGTCAGAGATCCATTGCAG 460 Query 50148 AGCCCAATCGGCCTTCTT 50165 |||||| ||||||||||| Sbjct 459 AGCCCAGTCGGCCTTCTT 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718251346068160