Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq274 208 1e-48
seq1257 111 2e-19
>seq274
Length=11782
Score = 208 bits (230), Expect = 1e-48
Identities = 741/1147 (65%), Gaps = 16/1147 (1%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| ||| |||| || || ||||||||||||| | | | | || | ||||| |||
Sbjct 2767 GCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCA 2826
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||||| | ||| || || ||||| | || | ||||| ||||| ||| ||
Sbjct 2827 GTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAG 2886
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|||||| ||||| || || ||| | || || || |||||| || | ||| || | |
Sbjct 2887 TGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTAC 2946
Query 71878 CAGACGACTCGAGCCTTTATTATATTCTTGT-ATCTCTT--TTCTCTTTCGTATTGTGTA 71934
|| | | || | | ||| | |||| | | | | |||| || || |
Sbjct 2947 CATA-GTTTCTGGGCCTTA--ACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCG 3003
Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACAC 71994
|| || ||| || || || || | ||| | | | || || || ||| | || |||
Sbjct 3004 TACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCAC 3063
Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 72054
|| | | |||||| || | | | || || ||||| || || ||||||||||| |||
Sbjct 3064 ATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGA 3123
Query 72055 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114
|| | || ||||| | | | || || || || ||||| ||| || |||
Sbjct 3124 GCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGG 3183
Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174
||| | | | ||| ||||| ||||| | ||||| || | | || |||| |||
Sbjct 3184 AACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTG 3243
Query 72175 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 72234
|| || ||||| || | |||||| |||||||| || |||||| |||||| || | |||
Sbjct 3244 TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATA 3303
Query 72235 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATT 72294
||||| || | |||||| || |||| ||| || ||| | ||||| || | ||
Sbjct 3304 CCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGATCCGGTGGATG 3363
Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354
||||| || || || || | || ||||| | || || || | || || |||
Sbjct 3364 TTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTGTCGTAG 3423
Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-G 72413
|| ||||| ||||| || ||| |||||| || || || ||| | || | ||| | |
Sbjct 3424 ATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT-GTGCCTG 3482
Query 72414 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 72473
||||| ||||| || | || || |||||||| || || |||| |||| ||
Sbjct 3483 GGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGACATAAG 3542
Query 72474 ATTGTACGTCTCAATAGCTGATTCTA---TATCCCATTGATGTATTCCTACCGCGACACG 72530
||||| |||| ||| || |||| |||| | | || || || || |||||
Sbjct 3543 GTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCAA---ATACCAACAGCCACACG 3599
Query 72531 CATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTT 72590
||| | ||| ||||| || ||||| || ||||| | ||| | |||| | ||| || |
Sbjct 3600 CATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTAAGACCT 3659
Query 72591 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 72650
||||| || || || ||||| || | ||| |||||||| ||||| | ||| | ||
Sbjct 3660 CTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCGGA 3719
Query 72651 ATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAG 72709
| || | || || | | | | || | || | | | ||| || || || ||||
Sbjct 3720 GTCGAAGTCCTCTTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTAGAGATCATAGGAG 3778
Query 72710 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 72769
| | ||| || ||||| || ||||||| | | | || || || | ||
Sbjct 3779 AGGGCTTCATGTTCTTAGGGTTGACATAGTGGTAAAGGTCGCTAATGACAGAAGACCATT 3838
Query 72770 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 72829
| || ||||||| |||||| || ||||| ||||| || | ||||| || || |||||||
Sbjct 3839 GCTTCTTTGTTTGCTTGTGGAGGTTTGACACGGCAATACGTGCGGCAAGGATAGCATAAT 3898
Query 72830 CTGGATG 72836
| || ||
Sbjct 3899 CCGGGTG 3905
Score = 91.5 bits (100), Expect = 2e-13
Identities = 319/495 (64%), Gaps = 5/495 (1%)
Strand=Plus/Plus
Query 70831 GTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 70890
||||| |||||||||||||| ||||| ||||| || |||| ||| |||||||| ||
Sbjct 1891 GTACGGAGATAGTACATGCCAGTTTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTG 1950
Query 70891 GTTA-GTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGAT 70949
|| | || |||| | || || || ||||| || | || || ||||||||
Sbjct 1951 GTAATCTTCCCCATAG-TGGGCTCTCTCATATGAATGTTTAGTGATTGGGATTGATCGAC 2009
Query 70950 GAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGT 71009
||||| || | ||| || ||||| | | ||| || || | |||||||||| ||
Sbjct 2010 AAAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCCCAAACGGT 2069
Query 71010 TTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATC 71066
|| |||| || | || | |||| ||||| | |||||||| || ||||| ||
Sbjct 2070 CTTGTAAAGAGCTTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTC 2129
Query 71067 TGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAG 71126
||||| || | || || || ||| ||| | | || | | | ||
Sbjct 2130 GGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGAG 2189
Query 71127 GAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACT 71186
| ||| ||||| ||||| || || |||| | || | ||||| |||||| ||
Sbjct 2190 CAACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATGTTCGA 2249
Query 71187 GGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 71246
|| || || || | | || || || |||| ||| || | ||| ||||| |||||
Sbjct 2250 TGTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTGGGCAT 2309
Query 71247 AGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTC 71306
||| || || || | || |||| | ||||||| ||||| || || || |
Sbjct 2310 AGGAGCAACTAACAAGCTGTTTCGTACACCATGTTGCTTGATTTGCTCCTTAAGGCTAGC 2369
Query 71307 CCAATTCCAAAGATC 71321
||||| ||| |||||
Sbjct 2370 CCAATCCCAGAGATC 2384
>seq1257
Length=2089
Score = 111 bits (122), Expect = 2e-19
Identities = 336/510 (66%), Gaps = 23/510 (5%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| ||||| ||||| || ||||| || || ||||| || | | || || ||
Sbjct 941 TTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTC 882
Query 41834 TCCATGAAATCAAACGGATTGGTAA--CATTATAAAtttttttAAATCCCAATTCAGAAA 41891
|||||||| || || || |||||| | || | || | | | || | || |
Sbjct 881 TCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGT---TGCCGAG--AGCGA 827
Query 41892 TCAAT---CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 41948
|| | | || |||| ||| || || ||| ||||||| | ||||| || |
Sbjct 826 CCAGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCA 767
Query 41949 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 42008
|| | || |||||| |||| || ||||||||||| || | ||| || ||||| |
Sbjct 766 GCAGAGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGA 707
Query 42009 TAATAGATCTTACTGTTT--CTTCACT--CGGTG-GATACAATAAATGTTTAAACATCAA 42063
| |||||| ||| | | || | ||| | | | | | ||| | || | |
Sbjct 706 T----GATCTT-CTGGATGACGTCCTTGCCGGGGCGGTTCTTGAGGTGTGTGAATAGTAG 652
Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123
|| ||||| || |||||||||||| || | | || | |||||||| || || ||
Sbjct 651 GCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAG 592
Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183
|||||||| || |||||||| || | ||| || || || || |||| ||| |||||
Sbjct 591 ACCGGGCATCAGACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAA 532
Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATG 42240
||| || || || || |||||||||||||| | || || || || |||||
Sbjct 531 GATACCCTCGACAGCAGCAAAGGCAATAAGACGCTGAGCAAAAGTGGAGTTCTTGTCAGA 472
Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
||||| | ||||||| |||||||||||
Sbjct 471 GATCCATTGCAGAGCCCAGTCGGCCTTCTT 442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671122891317440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |