Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1817 84.2 2e-11 >seq1817 Length=26529 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || || || || || || |||||||| ||||||||| | | | || || Sbjct 17017 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCCTCC 16958 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || || || |||||| | || | ||||||||||| ||||| ||||| ||||| Sbjct 16957 AACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 16898 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGTTTT 15333 || |||||||| || | || || || || | || ||| || || | || || || || Sbjct 16897 ATCTTGCTCTTGACGTTGTCAATCGTGTC-CGATGATTCAACCTCCAGAGTGATCGTCTT 16839 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||||| || || || || || ||||| Sbjct 16838 TCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362170619069304