Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 114 1e-20
>seq1817
Length=26529
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| |||||||| || | ||| || ||||||| |||| |||||| || || |||||
Sbjct 16258 GTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCA 16199
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| || || |||| ||||| || |||||||| ||||| || || | ||| || | |||
Sbjct 16198 GCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGATTTG 16139
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||| | | || || |||| |||||||| || ||||| || ||
Sbjct 16138 ACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTC 16079
Query 94991 TTCACAAAGATCTGCATG 95008
|| || ||||||||||||
Sbjct 16078 TTGACGAAGATCTGCATG 16061
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || ||||| | |||| ||||||
Sbjct 17018 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACCATCCTC 16959
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| ||| || || | ||||| | || ||| || || || ||||| ||||| ||||| |
Sbjct 16958 CAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTG 16899
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||||| | | | ||||| | || || || | ||||| || ||
Sbjct 16898 GATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGATCGTCTT 16839
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || | || || || |||||||||||
Sbjct 16838 TCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
||||||||||| || | ||| || ||||| | ||| | || |||||||| || ||
Sbjct 16777 GTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTCCAGCTGCTTACCC 16718
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
||||||| | || || ||||| || |||||||| || ||||| | || || |||
Sbjct 16717 GCAAAGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTC 16658
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| ||| ||||| | || || || | |||||||| || || || | |||
Sbjct 16657 ACATTATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTC 16598
Query 94991 TTCACAAAGATCTGCAT 95007
|||||||||||||||||
Sbjct 16597 TTCACAAAGATCTGCAT 16581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448280306523840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |