Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq407 114 2e-21 seq525 104 4e-18 >seq407 Length=27831 Score = 114 bits (126), Expect = 2e-21 Identities = 87/100 (87%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||||||| |||| |||||| || |||||||| || || |||||||| |||| Sbjct 19247 CGCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTA 19305 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| |||||||||||||| ||||||||| |||| Sbjct 19306 TCCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 19345 >seq525 Length=10352 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||||||||| |||||||| || ||||||||||| ||||| Sbjct 1005 GCCAAGCGCCACCGTAAGAT-TCTTCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 1063 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || ||||||||||| ||||||||| |||| Sbjct 1064 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 1102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073422587192