Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1817 95.1 1e-14 seq600 84.2 2e-11 >seq1817 Length=26529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 |||| ||||| | || || || || | ||||| || | |||||| | || | || | Sbjct 16057 ACAACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGT 16116 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | |||||||||||| | |||||| |||||| || || ||||| || ||||| | Sbjct 16117 CCTCCGACACCATCGACAACGTCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTG 16176 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 | || || || | |||| || || || ||||| || |||| | | | | ||||||| Sbjct 16177 ACCAGCAGCGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGCGACT 16236 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || || ||||| || |||| || ||||| Sbjct 16237 ACAACATCCAGAAGGAATCCACCCTCCACCTCGTCCT 16273 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | |||||| | || | || || Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || || || || ||||||||| Sbjct 16641 GACACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAA 16700 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| || | | || || || || ||||| | ||| |||||||||| ||| Sbjct 16701 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACAAC 16760 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || |||||||| ||||||| || || |||| | || |||| Sbjct 16761 ATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCGACTACGTGGTGGAA 16809 >seq600 Length=9993 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || || | |||||| | || | || || | | Sbjct 840 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 781 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| || || || || ||||| ||| Sbjct 780 GACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 721 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || ||||| || |||||||||| | ||| | || |||||| ||| Sbjct 720 CAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAAC 661 Query 26949 ATTCAAAAAGA 26959 || || || || Sbjct 660 ATCCAGAAGGA 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650768503680