Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 98.7 9e-16
seq600 84.2 2e-11
seq315 84.2 2e-11
>seq1817
Length=26529
Score = 98.7 bits (108), Expect = 9e-16
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045
|||| ||||| | || || || || | ||||| || | || ||| | || || |||
Sbjct 16057 ACAACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGT 16116
Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105
|| |||||||||||| | |||||| |||||| || || |||||||| ||||| |
Sbjct 16117 CCTCCGACACCATCGACAACGTCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTG 16176
Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165
| || ||| || |||||| || || |||||||| || |||| | | | ||||| |
Sbjct 16177 ACCAGCAGCGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGCGACT 16236
Query 24166 ATAACATTCAAAAAGAATCTAC 24187
| ||||| || || ||||| ||
Sbjct 16237 ACAACATCCAGAAGGAATCCAC 16258
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || || || || || | || ||| | || || ||| |
Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | || || ||||| ||||| || || || || |||||||||
Sbjct 16641 GACACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAA 16700
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| |||| || | | || ||||| || ||||| | | ||| ||||||| || |||
Sbjct 16701 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACAAC 16760
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || ||||||||
Sbjct 16761 ATCCAGAAGGAATCTAC 16777
>seq600
Length=9993
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| | || || ||| | | |
Sbjct 840 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 781
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| |||||| ||||| || || || || ||||| |||
Sbjct 780 GACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 721
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| || | || | || |||||||| |||||||||| ||| | || ||| || |||
Sbjct 720 CAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAAC 661
Query 24171 ATTCAAAAAGA 24181
|| || || ||
Sbjct 660 ATCCAGAAGGA 650
>seq315
Length=5603
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| || ||| | |||||||||||| | ||||| ||||| |||
Sbjct 1265 ATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 1206
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || || || || ||||| |||||| | ||||| | || ||| ||||| ||||| ||
Sbjct 1205 AAGGAGGGTATCCCCCCCGACCAACAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGAC 1146
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
| | ||| | || ||| || ||||| || || || |||||
Sbjct 1145 GGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTAC 1105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429925813741320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |