Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1919 140 2e-28
seq600 86.0 4e-12
seq1279 84.2 1e-11
>seq1919
Length=13974
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1826 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1885
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1886 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1920
>seq600
Length=9993
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
|| || ||||||||||| || || ||||| || || | || | || || | ||
Sbjct 638 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTCGAGCTGC 697
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || || || |||| || ||||| |||| ||||| || || |||||| ||| ||
Sbjct 698 TTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGAATCTTC 757
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||| ||||| | || || || | | || || || | || ||||| ||||||||
Sbjct 758 GACTTGACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTG 817
Query 38295 AAGGTTTTCACGAATATCTGCATGTTT 38321
| ||| || ||||| ||||||||| ||
Sbjct 818 AGGGTCTTGACGAAAATCTGCATGATT 844
>seq1279
Length=18713
Score = 84.2 bits (92), Expect = 1e-11
Identities = 207/314 (66%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCC 6233
||||| |||| |||| | || || ||||| |||||||| ||| | || |
Sbjct 17537 AACGTTCGTCGTGATGTCACCGATGCCTTCTATCGCTACAAGATGGAAAGAATTCAGACA 17478
Query 6234 AAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCT 6293
||| | || || || || || ||||| || || ||| ||||||| || ||||||
Sbjct 17477 AAGATTGAAGGCAAAGGTAATGGTATCAAGACTGTCGTTGTCAATCTGAGCAGTGTCGCT 17418
Query 6294 AAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCT 6353
|| | || | ||||| | | || | ||||| ||||| | ||| ||||| |||
Sbjct 17417 CAGTCTCTTGCCCGCCCAGGGTCATATGTCATTAAATACTTCGGTTTCGAGCTTGGTGCT 17358
Query 6354 CAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCC 6413
||||| | |||| | | || |||| ||| | || || | ||| | | |
Sbjct 17357 CAGACCAATATTGACCCTCCCGATGACCGCTGGATCATCAATGGTGCCCATGAAGCCTCT 17298
Query 6414 AAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGAT 6473
|||||||||||| |||||||||||||| ||||||||| || || | | ||| |
Sbjct 17297 AAGCTGCAGGACCATCTTGACGGCTTTATCAACAAGTTTGTCCTTTGCAAGAAGTGCAAG 17238
Query 6474 AACCCGGAGACCGA 6487
||||| ||||| ||
Sbjct 17237 AACCCTGAGACAGA 17224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334939264263464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |