Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq274 244 1e-59 seq1257 116 5e-21 >seq274 Length=11782 Score = 244 bits (270), Expect = 1e-59 Identities = 754/1156 (65%), Gaps = 34/1156 (3%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| ||| |||| || || ||||||||||||| | | ||| || | || |||||| Sbjct 2767 GCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCA 2826 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| | ||| || || ||||| | || | ||||| ||||| ||| || Sbjct 2827 GTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAG 2886 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||| ||||| ||||| ||| | || || || |||||| || | ||| || | | Sbjct 2887 TGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTAC 2946 Query 62927 CAGACGACTC-GAGCCTTTA--TTATAG--ATTTGTATCTCTTTTCTCTTTCGTATAGTG 62981 || | | || | ||||| | || | | | | || | ||| | | | | || Sbjct 2947 CATA-GTTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGT- 3004 Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGAC 63041 |||| ||| || || || || | |||| | | || || || || ||| || | Sbjct 3005 ---ACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGC 3061 Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101 |||| | | |||||| |||| | || || || ||||| || || ||||||||||| | Sbjct 3062 ACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGA 3121 Query 63102 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63161 |||| | || ||||| | | | ||| || || || ||||| ||| || | Sbjct 3122 GAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAA 3181 Query 63162 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63221 ||||| | | | ||| ||||| ||||| | ||||| || | | || |||| | Sbjct 3182 GGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCT 3241 Query 63222 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63281 |||| || ||||| || | |||||| |||||||| || |||||| |||||| || | | Sbjct 3242 TGTTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGA 3301 Query 63282 TACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA 63341 ||||||| || |||||||| || || | ||| || ||| | ||||| || | Sbjct 3302 TACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGAT----CCGG 3357 Query 63342 TTGAT----AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 63397 | ||| ||||| || || || || | || ||||| | || || || | || Sbjct 3358 TGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTGTG 3417 Query 63398 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63457 || ||||| ||||| ||||| || ||| |||||| || || || ||| | || | | Sbjct 3418 TCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT-G 3476 Query 63458 TGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA 63516 || | | ||||| ||||| || | || || |||||||| || || |||| || Sbjct 3477 TGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAAATATTTGCTGGA 3536 Query 63517 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTAC 63570 | || ||||| |||| ||| || |||| || |||| ||| || || Sbjct 3537 CATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCA------AATACCAAC 3590 Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63630 || |||||||| | ||||||||| || ||||| || ||||| | || | |||| | Sbjct 3591 AGCCACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAG 3650 Query 63631 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63690 ||| || | ||||| || || || ||||| || | ||| |||||||| ||||| | Sbjct 3651 GTAAGACCTCTCCAAGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGAC 3710 Query 63691 AATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAA 63749 ||| | |||| || | || || | | | | || |||| | | | ||| || | Sbjct 3711 AATTGCGGAGTCGAAGTCCTCTTTGTGTCTCATGAC-ACATTCGTATGTCTCCTTAGAGA 3769 Query 63750 TAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTT 63809 | |||||| | | ||| || ||||| |||||||||| | | | || || || Sbjct 3770 TCATAGGAGAGGGCTTCATGTTCTTAGGGTTGACATAGTGGTAAAGGTCGCTAATGACAG 3829 Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 | || | || ||||||| ||||| || ||||| ||||| || | ||||| || | Sbjct 3830 AAGACCATTGCTTCTTTGTTTGCTTGTGGAGGTTTGACACGGCAATACGTGCGGCAAGGA 3889 Query 63870 TGGCATAATCCGGATG 63885 | ||||||||||| || Sbjct 3890 TAGCATAATCCGGGTG 3905 >seq1257 Length=2089 Score = 116 bits (128), Expect = 5e-21 Identities = 337/510 (66%), Gaps = 23/510 (5%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 || ||||| ||||| ||||| || ||||| || || || || || | | || || || Sbjct 941 TTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTC 882 Query 32430 TCCATGAAATCGAATGGATTGGTAA--CATTATAAAtttttttAAATCCCAATTCAGAAA 32487 |||||||| ||||| || |||||| | || | || | | | || | || | Sbjct 881 TCCATGAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGT---TGCCGAG--AGCGA 827 Query 32488 TCAAT---CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 32544 || | | || ||||| || || || ||| ||||||| | ||||| || | Sbjct 826 CCAGTAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCA 767 Query 32545 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 32604 || | || |||||| |||| || ||||||||||| || | ||| || ||||| | Sbjct 766 GCAGAGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGA 707 Query 32605 TAATAGATCTTACTGTTT--CTTCACT--CGGTG-GATACAATAAATGTTTAAACATCAA 32659 | |||||| ||| | | || | ||| | | | | | ||| | || | | Sbjct 706 T----GATCTT-CTGGATGACGTCCTTGCCGGGGCGGTTCTTGAGGTGTGTGAATAGTAG 652 Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 || ||||| || ||| ||||||||||| | | || | |||||||| || || || Sbjct 651 GCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAG 592 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 |||||||| || |||||||| || | ||| || ||||| || |||| ||| ||||| Sbjct 591 ACCGGGCATCAGACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAA 532 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATG 32836 || || || || || |||||||||||||| | || || || || | ||||| Sbjct 531 GATACCCTCGACAGCAGCAAAGGCAATAAGACGCTGAGCAAAAGTGGAGTTCTTGTCAGA 472 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 ||||| | ||||||| ||||||||||| Sbjct 471 GATCCATTGCAGAGCCCAGTCGGCCTTCTT 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633616602742400