Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 125 6e-24
>seq1817
Length=26529
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||||||||||| || ||||||| | || || ||||||||
Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || || ||||| || || |||
Sbjct 16641 GACACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAA 16700
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| ||||| || || || | ||||| | || ||| | |||| |||||
Sbjct 16701 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACAAC 16760
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| || || ||||| || || ||| | || || | ||| | || ||||
Sbjct 16761 ATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCGACTACGTGGTGGAA 16809
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || || ||||| ||||| || || | ||||| | || || || || ||
Sbjct 16808 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATC 16867
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| || ||| ||||| ||||| ||||| ||||||||
Sbjct 16868 GGACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 16927
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| || || || || || || || |||| ||||||| | |||| |||||
Sbjct 16928 ACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTACAA 16987
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || ||||| || || |||||
Sbjct 16988 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 17020
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 25003 AAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACA 25062
||| | | || ||||| | ||||| || ||||||| |||| |||||||| || ||||
Sbjct 16357 AAACAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACA 16416
Query 25063 CTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122
||||||| | ||| || ||| ||||| || || || || || ||||||||||
Sbjct 16417 CTATCGACAACGTTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGC 16476
Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182
| | ||||| |||||||| || | || |||| || || | ||| ||||| ||||
Sbjct 16477 GATTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTC 16536
Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || || ||| | || ||
Sbjct 16537 AGAAGGAGTCTACTCTCCATCTTGTCCT 16564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433317733376360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |