Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1817 125 6e-24 >seq1817 Length=26529 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||||||||| || ||||||| | || || |||||||| Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || ||||| || || ||| Sbjct 16641 GACACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAA 16700 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| || || || | ||||| | || ||| | |||| ||||| Sbjct 16701 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACAAC 16760 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || || ||||| || || ||| | || || | ||| | || |||| Sbjct 16761 ATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCGACTACGTGGTGGAA 16809 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||| || || | ||||| | || || || || || Sbjct 16808 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATC 16867 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| || ||| ||||| ||||| ||||| |||||||| Sbjct 16868 GGACACGATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 16927 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| || || || || || || || |||| ||||||| | |||| ||||| Sbjct 16928 ACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTACAA 16987 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || || ||||| Sbjct 16988 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCT 17020 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 25003 AAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACA 25062 ||| | | || ||||| | ||||| || ||||||| |||| |||||||| || |||| Sbjct 16357 AAACAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACA 16416 Query 25063 CTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122 ||||||| | ||| || ||| ||||| || || || || || |||||||||| Sbjct 16417 CTATCGACAACGTTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGC 16476 Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182 | | ||||| |||||||| || | || |||| || || | ||| ||||| |||| Sbjct 16477 GATTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTC 16536 Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || || ||| | || || Sbjct 16537 AGAAGGAGTCTACTCTCCATCTTGTCCT 16564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317733376360