Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 113 4e-20
seq600 105 6e-18
seq315 102 7e-17
>seq1817
Length=26529
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||||| ||||| || || |||| | || || || | |
Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || || ||||||||||||||||| |||||||||
Sbjct 16641 GACACCATCGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATCAA 16700
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| ||||| || || ||| | || || ||| || || ||| ||||||
Sbjct 16701 CAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACAAC 16760
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || ||||| ||| | ||| | ||| | ||| | || || ||
Sbjct 16761 ATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCGACTACGTGGTGG 16807
Score = 96.9 bits (106), Expect = 3e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||||||||||||||| || ||||| ||||| || | || || ||||||||
Sbjct 16437 AAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAGCGATTGATTTTCGCCGGCAAG 16496
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| ||| ||| | ||||| ||||||||||| || || || ||
Sbjct 16497 CAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATTCAGAAGGAGTCTAC 16549
>seq600
Length=9993
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || ||||| || |||| ||||| ||||| | | |
Sbjct 840 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 781
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || ||||| ||||||||||| || || ||||| |||
Sbjct 780 GACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 721
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | || ||| || ||| ||||||| ||||||
Sbjct 720 CAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAAC 661
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 660 ATCCAGAAGGA 650
>seq315
Length=5603
Score = 102 bits (112), Expect = 7e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || ||||| | |||| ||| | ||| || ||||
Sbjct 1277 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 1218
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| || ||||| ||||| || || || || ||||| ||
Sbjct 1217 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAGCGCCTGATCTTCGCCGGAAAG 1158
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| ||| ||| ||||||| |||||||| || || || || |||
Sbjct 1157 CAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTACC 1104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419718055594360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |