Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1119 114 3e-20
seq274 91.5 3e-13
>seq1119
Length=22286
Score = 114 bits (126), Expect = 3e-20
Identities = 100/122 (82%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| || || ||||||||||| || || ||| |||||| ||||| ||| ||
Sbjct 19612 CTCACTCGCGTATGCGCGGTCTTTCCGGTGGTCAGCGTGTCAAAGTTGTCCTCGCTGCTT 19553
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||||| |||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 19552 GCTC-GTGGCAACGACCTCACTTAATCGTTCTCGACGAGCCTACCAACTATCTCGACCGT 19494
Query 280821 GA 280822
||
Sbjct 19493 GA 19492
>seq274
Length=11782
Score = 91.5 bits (100), Expect = 3e-13
Identities = 179/262 (68%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 293122 TGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCC 293181
|||||||||||||||||||| ||||| || | | | | || | |||||| |||
Sbjct 2002 TGATCGACAAAGGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAGATTTCC 2061
Query 293182 CACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGAC 293241
|| |||||||| | || |||| || | | ||||| || ||||| || ||
Sbjct 2062 CAAACGGTCTTGTAAAGAGCTTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAA 2121
Query 293242 CCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAG 293300
|| || | |||||| || |||||||||| | || ||||| || |||| | ||| ||
Sbjct 2122 CCACCTTCGGCAATGATGCGGTTCTTCATGCTGTCAGACCAGAGACCCATGT-CAACAAG 2180
Query 293301 CTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTA 293360
|| || | ||| ||| ||||| ||||||| ||||| || ||||| |||
Sbjct 2181 GTCCTTGAGCAACCAAGGGTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTA 2240
Query 293361 AATGTTCGAAGTGATGGGTTCG 293382
||||||||| ||| ||| |||
Sbjct 2241 AATGTTCGATGTGTAGGGCTCG 2262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027811199154904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |