Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1817 129 5e-25 >seq1817 Length=26529 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | | || | || | || ||||| || || |||||||| ||| Sbjct 16291 ATGCCACCACGTAGACGAAGGACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCG 16232 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||| ||| ||| |||||||| || |||||| | || | ||||| ||||| ||| Sbjct 16231 CTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGA 16172 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || |||||| ||| | | || | |||||||| ||| || Sbjct 16171 GGAATGCCTTCCTTATCCTGAATCTTGGATTTGACGTTGTCGATGGTGTCGGAGGACTCC 16112 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || ||||| || || || || || || ||||||||| Sbjct 16111 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 16061 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | || || || | ||| || || || || |||||||| ||||| Sbjct 17035 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTT 16976 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| ||| ||| || | || ||||||||| |||| || || |||||||| || ||| Sbjct 16975 AGAGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGA 16916 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||||||| ||||| ||||| || | | |||| ||||| | ||||| || Sbjct 16915 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATCGTGTCCGATGATTCAACC 16856 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||| || || |||| || || || || |||||||| Sbjct 16855 TCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420124445965728