Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq274 161 1e-34 seq1257 116 4e-21 >seq274 Length=11782 Score = 161 bits (178), Expect = 1e-34 Identities = 710/1110 (64%), Gaps = 23/1110 (2%) Strand=Plus/Plus Query 114287 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 114346 || || ||||| || ||||| || || || || || || | ||| || || || || Sbjct 2584 TCTGCAAGACCCTGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGCT 2643 Query 114347 GTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 114406 ||||| || | || ||||||| || || || || | |||||| |||| Sbjct 2644 TCGGGAACGGGGTAGTAGTTGACATCGATAGTTCTGTTCAGGTTGTGGGTGACGACCTGG 2703 Query 114407 GTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTA 114463 || | ||| || ||||||| | | ||| | || | || | ||| || || Sbjct 2704 GTAACTTCGTGCAGCTTTTGGAAGTCATAGGTACCGTTGGTGTAGTCAACGAATGAC--- 2760 Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || || | ||||||| || || || | |||||| | | | |||||| ||| Sbjct 2761 GGCAGCGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATA 2820 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || || || ||||| || ||||| ||| || || | |||||| ||||| ||| | Sbjct 2821 ATCTCAGTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGG 2880 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || || |||||||||||||||| | || |||| ||||| || || | || ||||| Sbjct 2881 TTGCAGTGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATG 2940 Query 114644 GCCTTCCAGACATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACT 114701 || | ||| | | ||| || | |||| | || || || |||| |||| Sbjct 2941 GCGTACCATAGTTTCTGGGCCTTAACCTTCTGGCGAC--CACGACCTTCTGCCTCATACT 2998 Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761 | ||| | ||||||||| || ||||| | | || | || || || || | | Sbjct 2999 TCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAG 3058 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 |||| | ||| | ||| | || || |||||||||||||||||| ||||| || |||| Sbjct 3059 GGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCC 3118 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 ||||||| ||| ||||| ||| || ||||||| | || || || || | | Sbjct 3119 AGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGT 3178 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CC 114937 | | || || | || |||| |||||| ||||| || || | || | | ||| || Sbjct 3179 CAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCC 3238 Query 114938 TTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGA 114997 | | |||| |||||| || || || || ||| || || || || | ||| || Sbjct 3239 TCTTG-TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGC 3297 Query 114998 ATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACAT 115055 | |||||||| ||| ||||| || || ||| || ||| | | | || | || Sbjct 3298 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCC--AGTAGCACGGATCC 3355 Query 115056 CATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 ||||||| | ||| ||||| || || ||| ||||| || || | |||| Sbjct 3356 GGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTG 3415 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175 || ||||||| || || || ||| |||| | | | | ||||||| | || | Sbjct 3416 TGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT 3475 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG-- 115233 ||| | ||||| ||||| ||||| || || || | |||||| |||| ||| ||| Sbjct 3476 GTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAA-ATA-TTTGCT 3533 Query 115234 GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 115293 |||||| | ||| |||| | ||| | | || || |||||| | | Sbjct 3534 GGACATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCAAATACCAACAGC 3593 Query 115294 GACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 115353 || ||||| | ||||| || || |||| | | | ||| |||| || | ||||| Sbjct 3594 CACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTA 3653 Query 115354 ACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | | ||||||||||||||| ||||| || Sbjct 3654 AGACCTCTCCAAGGTCTTGAAGCCAAAGTA 3683 >seq1257 Length=2089 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| |||||||||||||| |||||||| || || |||||| || || ||||| ||||| Sbjct 636 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACC 577 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||||||||||||| | |||| || ||||||||| ||||| ||| Sbjct 576 ACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGACAGC 517 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAA 126204 || || |||| ||||||| |||||| Sbjct 516 AGCAAAGGCAATAAGACGCTGAGCAAA 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597339084307520