Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq600 102 9e-17
seq1817 100 3e-16
>seq600
Length=9993
Score = 102 bits (112), Expect = 9e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| || | || || || | || || |||||||| ||
Sbjct 644 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTCGAGCTGCTTGCCC 703
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130
||||| || | |||||| ||||||| || | | |||||||||| ||| | || | ||
Sbjct 704 GCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC-TGAATCTTCGACTT 762
Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190
|| | | | |||||||| || ||||| || | ||||| || || ||||| || ||
Sbjct 763 GACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGT 822
Query 42191 CTTTACAAAGATTTGCAT 42208
||| || || || |||||
Sbjct 823 CTTGACGAAAATCTGCAT 840
>seq1817
Length=26529
Score = 100 bits (110), Expect = 3e-16
Identities = 143/196 (73%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || |||||| || | || || || ||||| ||||||||
Sbjct 16252 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAA 16193
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| | |||||||||||| | || | || ||||| ||| ||| | || | ||||| |||
Sbjct 16192 ATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC-TGAATCTTGGATTTGA-CGT 16135
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || ||||| || | |||||||| ||||| || || ||||| |
Sbjct 16134 TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGA 16075
Query 42196 CAAAGATTTGCATTTT 42211
| ||||| ||||| ||
Sbjct 16074 CGAAGATCTGCATGTT 16059
Score = 93.3 bits (102), Expect = 5e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| |||| || |||||| || || ||||| || ||||| || |
Sbjct 17024 ACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGACC 16965
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | ||||||||||||||| || ||||| || ||||| | || | || |||||
Sbjct 16964 ATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGGAATGCCTTCCTT 16905
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| || |||| ||| | | | |||||| ||||| || || | ||||
Sbjct 16904 GTCCTGGATCTTGCTCTTGA-CGTTGTCAATCGTGTCCGATGATTCAACCTCCAGAGTGA 16846
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
| || || || || | ||||| || ||||| ||||||
Sbjct 16845 TCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCATT 16808
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || ||||| || |||| || ||||||||||| || ||
Sbjct 16771 TCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTCCAGCTGCTTACCCGCAAAG 16712
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| |||||||| || |||| || | | |||||||||| ||| || || | |
Sbjct 16711 ATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTA 16652
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||| ||| || || || | |||||||| ||||| || | ||||| |||
Sbjct 16651 TCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTTGCCGGTCAAAGTCTTCACA 16592
Query 42198 AAGATTTGCAT 42208
||||| |||||
Sbjct 16591 AAGATCTGCAT 16581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543199599928960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |