Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 98.7 1e-15
>seq1817
Length=26529
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || ||||| || || |||||||| || || || || |||||
Sbjct 16792 AGAACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCT 16733
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || ||| | || || ||||| || ||||| ||||| || || || ||
Sbjct 16732 TCCAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCC 16673
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | || || |||| || | ||||
Sbjct 16672 TGGATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTC 16613
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||||||| || || || || |||||
Sbjct 16612 TTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || ||||||||||| || | | ||| || | ||
Sbjct 16564 AGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCC 16505
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||||||||| |||| | ||||| ||||||||||| || || || || |||
Sbjct 16504 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCT 16445
Query 64352 TGTATTTT 64359
|| || ||
Sbjct 16444 TGGATCTT 16437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499632658631360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |