Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq274 170 2e-37 >seq274 Length=11782 Score = 170 bits (188), Expect = 2e-37 Identities = 488/741 (66%), Gaps = 12/741 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATG 93954 |||| || || ||||| || || || || | ||||| || | || || ||| | | || Sbjct 3511 CCCCCACTCTTTTCAATGCTGGAACACCCCAGGCACAGCTGGCCTCCTGCTTCTTAGTTG 3452 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | |||| ||| || || || | ||||| |||||| |||||| | ||| Sbjct 3451 AC-ATGAAGGAAGACAGTATTGAGGGTATCTACGACACACTCAAGACCTGTGCCATGATC 3393 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || ||||| ||| ||||| | ||||| | || || ||| Sbjct 3392 TCCAAGACAGCTGGAGGTATCGGTCTCAACATCCACCGGATCCGTGCTACTGGCTCATAC 3333 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| |||||| ||||| ||||| || || |||| || ||| | || || ||||||||| Sbjct 3332 ATCGCCGGTACGAATGGTACCTCTAATGGTATCGTGCCCATGTTGCGAGTTTTCAACAAC 3273 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || | ||||| |||||||||||| | |||| ||| | || || | |||||| Sbjct 3272 ACCGCCAGATACGTTGACCAGGGTGGTAACAAGAGGCCCGGTGCCTTTGCTATATATCTC 3213 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 || ||||||||| ||| || | ||| | ||||| || |||||||| || || || Sbjct 3212 GAACCCTGGCACCAGGATGTCTTCGAGTTCCTTGACCTTCGCAAGAACCATGGTAAAGAA 3153 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || || ||| |||||||||| | || |||||||| ||||| || Sbjct 3152 GAAGTCCGTGCTCGCGATCTTTTCCTCGCTCTCTGGATTCCTGACCTTTTCATGAAGCGT 3093 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || ||||| ||| || |||| || | || || | ||| || || || || |||| Sbjct 3092 GTTGAGAAGAACGGCGAGTGGACCCTCATGTGCCCTAGTGAGTGCCCGGGTCTTGCCGAT 3033 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATC-GCAGGGCAAG---GC 94430 || | || ||||||| |||||| | || || | | ||| | | || Sbjct 3032 GTCTACGGTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGGTCGTGGTCGC 2973 Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490 || |||||||| | || ||| || ||| | || |||| | ||| ||||| Sbjct 2972 CA-GAAGGTTA---AGGCCCAGAAACTATGGTACGCCATTCTGGAGGCTCAGACCGAGAC 2917 Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 || | |||| ||| | | |||||| | ||| |||| |||| ||| ||| || ||| Sbjct 2916 CGGGAATCCCTTCATGCTTTACAAGGATCACTG-CAACCGCAAGAGCAATCAGAAGAACC 2858 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || || || || || ||||||| |||||| ||||||| | |||| || | Sbjct 2857 TTGGAACTATTCGTAGTTCTAACTTGTGCACTGAGATTATCGAGTACTCGGCTCCCGATG 2798 Query 94610 AGATTGCTGTGTGTAACCTGG 94630 || | || || || ||| ||| Sbjct 2797 AGGTAGCCGTCTGCAACTTGG 2777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494711178226240