Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1257 105 7e-18
seq1817 104 2e-17
seq315 98.7 1e-15
seq600 86.0 6e-12
>seq1257
Length=2089
Score = 105 bits (116), Expect = 7e-18
Identities = 338/522 (65%), Gaps = 23/522 (4%)
Strand=Plus/Plus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385
|| || ||| ||||||| ||||| | ||||| || | |||||| | | | | ||
Sbjct 427 GTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCAATGGATCTCTGACAAGAACTCC 486
Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445
|| | || |||| | | ||||| || |||||||| | || || |||
Sbjct 487 ACTTTTGCTCAGCGTCTTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGGCGCA 546
Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505
|| ||| |||| || | | || | | || | |||||||| || || ||| ||||
Sbjct 547 TTCGCCTCCATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAAC 606
Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTA------ 52558
||| | || || || ||||| || |||||||| ||||| || ||||| ||| |
Sbjct 607 GAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTACTATTCACACAC 666
Query 52559 --CAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAG 52616
||||| ||| ||| || |||| |||| || || ||| ||
Sbjct 667 CTCAAGAACCGCC---CCGGCAA---------GGACGTCATCCAGAAGATCATCACAGAT 714
Query 52617 GCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATG 52676
|| || || |||||| | || || | || | || ||||| | ||||||||||||
Sbjct 715 GCTGTCGCCATCGAACAAGAATTCCTGACTGAGGCTCTGCCCTGTGCTCTGCTGGGCATG 774
Query 52677 AACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC 52736
||||| | | ||| | ||||||||||| || || || || || |||| |||
Sbjct 775 AACGCCAACTTGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTACTGGTCGCTCTC 834
Query 52737 GGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795
|| || | | ||| || | || ||| || || || || ||| | ||||| || ||
Sbjct 835 GG-CAACGAGAAGGTCTACCGATCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCT 893
Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| |||||||||||||| ||||||||||| ||||| || ||
Sbjct 894 TGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 935
>seq1817
Length=26529
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| | ||| | | | || ||||| || |||||||||||||| | ||| || ||| ||
Sbjct 16790 AACGAGATGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCTTC 16731
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
|| || ||||| | | |||| || |||||||| || || || ||||| || |||||
Sbjct 16730 CAGCTGCTTACCCGCAAAGATAAGTCGCTGTTGATCGGGGGGAATACCCTCCTTGTCCTG 16671
Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584
||| || || | | || | |||||| | |||||| ||||| | || | || ||
Sbjct 16670 GATCTTGCTCTTCACATTATCGATGGTGTCTGACGACTCAACCTCTAAGGTGATGGTCTT 16611
Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| |||| ||| || ||||| ||||||||
Sbjct 16610 GCCGGTCAAAGTCTTCACAAAGATCTGCAT 16581
Score = 102 bits (112), Expect = 8e-17
Identities = 143/197 (73%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||||||| ||| || ||||| ||||| || || |
Sbjct 16255 GATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCG 16196
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || | ||||| ||||| ||||| || ||||| || || ||| | || | ||| |
Sbjct 16195 AAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC-TGAATCTTGGATTTGAC 16137
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| | | |||||||| ||||||||||| | || | || || ||||| || || |
Sbjct 16136 GTTGT-CGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCT 16078
Query 138599 TTACAAAAATCTGCATG 138615
| || || |||||||||
Sbjct 16077 TGACGAAGATCTGCATG 16061
>seq315
Length=5603
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | || || ||||||||| || || ||||
Sbjct 1108 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCG 1167
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||||||||| || || ||||| || ||||| ||| || || | |
Sbjct 1168 AAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACA 1227
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| ||||||||||||| || | || || || ||||| || ||
Sbjct 1228 TTG-TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTT 1286
Query 138600 TACAAA 138605
|| ||
Sbjct 1287 CACGAA 1292
>seq600
Length=9993
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||| | || || || ||||| || || || | |
Sbjct 649 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTCGAGCTGCTTGCCCGCGAA 708
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542
||||| ||||||||||| || || || || || ||||| ||| | || | || |
Sbjct 709 GATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC-TGAATCTTCGACTTGACAT 767
Query 138543 T-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||||| | ||||||||||| | || | || ||||| || || || || |
Sbjct 768 TATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGA 827
Query 138602 CAAAAATCTGCATG 138615
| ||||||||||||
Sbjct 828 CGAAAATCTGCATG 841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496250340823680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |