Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1817 123 2e-23
>seq1817
Length=26529
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || |||||||| ||||| || || ||||| | || | ||| ||
Sbjct 16270 ACGAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCA 16211
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| ||||| ||| | |||||||| |||||||| || ||||||||||| ||||| |||
Sbjct 16210 AGTTGCTTTCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGA 16151
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || ||||| || | || | ||||||||| ||||| || || || || | || ||
Sbjct 16150 ATCTTGGATTTGA-CGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTT 16092
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || || || || || || || |||||
Sbjct 16091 GCCAGTGAGGGTCTTGACGAAGATCTGCAT 16062
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172
||| || ||||| | | ||| | |||||||| || ||||| ||||| || || |||||
Sbjct 17036 TCCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 16977
Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232
| || | ||| ||||| || || || ||| | || | |||||| ||||| || ||
Sbjct 16976 TAGAGTGCGACCATCCTCCAACTGCTTACCAGCGAAGATAAGTCGTTGTTGGTCAGGGGG 16917
Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291
||||||||| || || || || || |||| || | || | ||||| || || || |
Sbjct 16916 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCAATCGTGTCCGATGATTCAA 16858
Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || ||||| | ||| || || || | || || || || || |||||
Sbjct 16857 CCTCCAGAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAGATCTGCAT 16809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451992216322240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |