Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq274 134 2e-26 seq1257 129 7e-25 >seq274 Length=11782 Score = 134 bits (148), Expect = 2e-26 Identities = 704/1110 (63%), Gaps = 23/1110 (2%) Strand=Plus/Plus Query 116248 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 116307 || || ||||| || ||||| || || || || || || | ||| || || || || Sbjct 2584 TCTGCAAGACCCTGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGCT 2643 Query 116308 GTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 116367 ||||| || | || ||||||| || || || || | |||||| |||| Sbjct 2644 TCGGGAACGGGGTAGTAGTTGACATCGATAGTTCTGTTCAGGTTGTGGGTGACGACCTGG 2703 Query 116368 GTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTA 116424 || | ||| || ||||||| | | ||| | || | || | ||| || || Sbjct 2704 GTAACTTCGTGCAGCTTTTGGAAGTCATAGGTACCGTTGGTGTAGTCAACGAATGAC--- 2760 Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || || | ||||||| || || || | |||||| | | | |||||| ||| Sbjct 2761 GGCAGCGCAAGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATA 2820 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || ||||| || ||||| ||| || || | |||||| ||||| ||| | Sbjct 2821 ATCTCAGTGCACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGG 2880 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||| ||||| | || |||| ||||| || || | || ||||| Sbjct 2881 TTGCAGTGATCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATG 2940 Query 116605 GCCTTCCATACATCGGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACT 116662 || | ||||| | ||| || | |||| | || || || |||| |||| Sbjct 2941 GCGTACCATAGTTTCTGGGCCTTAACCTTCTGGCGAC--CACGACCTTCTGCCTCATACT 2998 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTG 116722 | ||| | ||| ||||| || ||||| | || | || || || || | | Sbjct 2999 TCTCGTACAAGGCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAG 3058 Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 116782 | || | ||| | ||| | || || |||||| ||||||||||| ||||| || |||| Sbjct 3059 GGCACATGAGGGTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCC 3118 Query 116783 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 116842 |||| || ||| ||||| ||| || ||||||| | || || || || | | Sbjct 3119 AGAGAGCGAGGAAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGT 3178 Query 116843 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CC 116898 | | || || | || |||| |||||| ||||| || || | || | | ||| || Sbjct 3179 CAAGGAACTCGAAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCC 3238 Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 | | |||| |||||| || || || || || ||| || || || | ||| || Sbjct 3239 TCTTG-TTACCACCCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGC 3297 Query 116959 ATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACAT 117016 | |||||||| ||| ||||| || || ||| || ||| | | || | || Sbjct 3298 ACGATACCATTAGAGGTACCATTCGTACCGGCGATGTATGAGCC--AGTAGCACGGATCC 3355 Query 117017 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGAC 117076 |||||||| | ||| ||||| || || ||| ||||| || || | |||| Sbjct 3356 GGTGGATGTTGAGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCTTGAGTG 3415 Query 117077 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 117136 || ||||||| || || || ||| |||| | | | | ||||||| | || | Sbjct 3416 TGTCGTAGATACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCT 3475 Query 117137 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG-- 117194 ||| | ||||| ||||| ||||| || || || | |||||| |||| ||| ||| Sbjct 3476 GTGCCTGGGGTGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAA-ATA-TTTGCT 3533 Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 |||||| | ||| |||| | ||| | | || || |||||| | | Sbjct 3534 GGACATAAGGTTGTAAGTCTGAATGACTTTCTCTACATTATCGCCCCAAATACCAACAGC 3593 Query 117255 GACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 117314 || ||||| | ||||| || || |||| | | | ||| |||| || | ||||| Sbjct 3594 CACACGCATGATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTA 3653 Query 117315 ACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 | | ||||||||||||||| ||||| || Sbjct 3654 AGACCTCTCCAAGGTCTTGAAGCCAAAGTA 3683 >seq1257 Length=2089 Score = 129 bits (142), Expect = 7e-25 Identities = 304/454 (67%), Gaps = 14/454 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 936 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 877 Query 127291 AAAATCAAATGGGTTCTTTGA---GTT--CCAAATTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | || || || | |||| | | | | | || Sbjct 876 GAAGTCGAAGGGGTTGGTAGATCGGTAGACCTTCTCGTTGCCGAGAGCGACCAGT----- 822 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || || || | |||| |||| ||||| | |||| | | |||||| || | || Sbjct 821 -AGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAAGTTGGCGTTCATGCCCAGCAG 763 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 ||| || || || || | ||| | | || ||| | ||||| || | ||| Sbjct 762 AGCACAGGGCAGAGCCTCAGTCAGGAATTCTTGTTCGATGGCGACAGCATCTGTGATGAT 703 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCT-TGAAGAGTTCCACAGCAA 127523 || || |||| || || | || | | | || | |||| ||| ||| | Sbjct 702 CTTCTGGATGACGTCCTTGCCGGGGCGGTT-CTTGAGGTGTGTGAATAGTAGGCAAGCGA 644 Query 127524 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 127583 | || ||| |||||||||||||| |||||||| || || |||||| ||||| |||| Sbjct 643 AGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCA 584 Query 127584 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 127643 | ||||| |||||||||||||||||||| | |||| |||| ||||||||| |||| Sbjct 583 TCAGACCACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCT 524 Query 127644 CCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 | ||| || || |||| ||||||| ||||| Sbjct 523 CGACAGCAGCAAAGGCAATAAGACGCTGAGCAAA 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613492291775040