Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq315 141 1e-28
seq600 131 2e-25
seq1817 111 2e-19
>seq315
Length=5603
Score = 141 bits (156), Expect = 1e-28
Identities = 164/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | | ||| | |||||| || | ||| |||||| ||||| ||||||||||
Sbjct 1073 TGCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGG 1132
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || || || |||| ||||||||||| |||||||| |||| |||||| ||||||| |
Sbjct 1133 AGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCGGGGG 1192
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | |||||||||| |||||| ||||| | | | |||||| || ||||
Sbjct 1193 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCA 1252
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585
| || | |||||||| ||||||||||| || || || |||
Sbjct 1253 CCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 1293
>seq600
Length=9993
Score = 131 bits (144), Expect = 2e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || || | || |||||||| ||||| ||||||||||| || || || | || ||
Sbjct 631 CACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCATCTTC 690
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||| ||||| || || ||||| ||||||| || | | ||||||||||
Sbjct 691 GAGCTGCTTGCCCGCGAAGATTAATCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 750
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| | | | |||||||| || ||||| || | ||||| || ||
Sbjct 751 AATCTTCGACTTGACATTATCGATGGTGTCGCTAGACTCCACCTCAAGGGTGATAGTCTT 810
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || || || || |||||
Sbjct 811 ACCCGTGAGGGTCTTGACGAAAATCTGCAT 840
>seq1817
Length=26529
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | ||| |||||| || || |||||||||||||| || || | || ||
Sbjct 16561 ACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTTCGGCCATCCTCA 16502
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| ||||| ||||| ||||||| || | | ||||||||| |
Sbjct 16501 AGCTGCTTGCCGGCGAAAATCAATCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCTTGG 16442
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||| | ||| | | | ||||| || ||||| || | |||||||| ||
Sbjct 16441 ATCTTCGACTT-AACGTTGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTT 16383
Query 46564 GCCCGTCAGCGTTTTAAC 46581
|| || || || || ||
Sbjct 16382 TCCGGTAAGGGTCTTGAC 16365
Score = 107 bits (118), Expect = 2e-18
Identities = 143/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||| |||||||| | || || || ||||| || |||||
Sbjct 16252 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCAAGTTGCTTTCCAGCGAAA 16193
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| ||||||||||| | || | || ||||| ||| ||||| |||| |||
Sbjct 16192 ATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGATTTGA-CGTT 16134
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||| || ||||| || | |||||||| ||||| || || || || ||
Sbjct 16133 GTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 16074
Query 46582 AAAGATTTGCATTTTG 46597
||||| ||||| |||
Sbjct 16073 GAAGATCTGCATGTTG 16058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565224664706880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |