Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09-
06] 1,944 sequences; 35,539,942 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq315 131 2e-25
seq600 122 9e-23
seq1817 120 3e-22
>seq315
Length=5603
Score = 131 bits (144), Expect = 2e-25
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 38248 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
||||| ||||| || || || |||||||| ||||||||| |||| || ||| | ||||
Sbjct 1299 AAATAGCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGA 1240
Query 38306 CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACA 38365
|| | | | | | || || |||| ||||| ||||| || ||| ||||||||||
Sbjct 1239 CACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACA 1180
Query 38366 GCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 38425
||| || || | ||| || || ||||| || |||| || |||||| ||||||||||||
Sbjct 1179 GCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACAT 1120
Query 38426 CCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| ||||| | || || || ||||||| |||
Sbjct 1119 CCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGT 1086
>seq600
Length=9993
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || |||||||| || || |||||| | || || ||| | | |
Sbjct 840 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 781
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || || | ||||| |||||||| ||| ||||||||
Sbjct 780 GACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 721
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||||||||| ||||| || || | || |||||| ||||||||||
Sbjct 720 CAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAAC 661
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||| || || || | ||||| ||
Sbjct 660 ATCCAGAAGGAGAGC-ACCCTCCACCTTGTGCTCCG 626
>seq1817
Length=26529
Score = 120 bits (132), Expect = 3e-22
Identities = 159/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || ||||| ||||||||| | || || ||| | |
Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | || | | |||| || |||| ||||| ||||| |||||| |||| |
Sbjct 16641 GACACCATCGATAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATC 16698
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| || || | ||||| || |||||||| |||| || || |||| ||||||||
Sbjct 16699 AACAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACA 16758
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| |||||| | || || ||| | || || ||
Sbjct 16759 ACATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCG 16795
Score = 114 bits (126), Expect = 1e-20
Identities = 159/219 (73%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || | || || || || ||||| | || || || | |
Sbjct 16808 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATC 16867
Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||| | || |||| | |||| || |||| ||||| || || |||||| | |||
Sbjct 16868 GGACACGATTGACAACG--TCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 16925
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| || || || | ||| || || ||| |||| || | ||||| || | |||||||
Sbjct 16926 CAACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTAC 16985
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| ||||| |||||||||| |||||||| |||
Sbjct 16986 AACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGT 17024
Score = 111 bits (122), Expect = 2e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||
Sbjct 16059 AACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCC 16118
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | ||| || || | || || || || ||||| | ||
Sbjct 16119 TCCGACACCATCGACAACG-TCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGA 16177
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| | |||| ||| || || || || || || | ||||| || | ||||||
Sbjct 16178 CCAGCAGCGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGCGACTA 16237
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||| |||||| | || || || | || || |||
Sbjct 16238 CAACATCCAGAAGGAATCCACCCTCCACCTCGTCCTTCGT 16277
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38248 AAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA 38307
||| | |||| || || || || || || ||||||||| |||| || ||| | | ||||
Sbjct 16357 AAACAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACA 16416
Query 38308 GCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAG 38366
| | |||| |||| || |||| ||||| ||||| || || |||||||||||
Sbjct 16417 CTATCGACAACG-TTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAG 16475
Query 38367 CGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATC 38426
|| | |||| ||| ||||| ||||| || || | || ||||| ||||||||||||
Sbjct 16476 CGATTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATT 16535
Query 38427 CAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| ||||| | || || ||| | || || |||
Sbjct 16536 CAGAAGGAGTCTACTCTCCATCTTGTCCTCCGT 16568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500160645800960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |