Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq315 131 2e-25 seq600 122 9e-23 seq1817 120 3e-22 >seq315 Length=5603 Score = 131 bits (144), Expect = 2e-25 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 38248 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 ||||| ||||| || || || |||||||| ||||||||| |||| || ||| | |||| Sbjct 1299 AAATAGCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGA 1240 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACA 38365 || | | | | | || || |||| ||||| ||||| || ||| |||||||||| Sbjct 1239 CACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACA 1180 Query 38366 GCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 38425 ||| || || | ||| || || ||||| || |||| || |||||| |||||||||||| Sbjct 1179 GCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACAT 1120 Query 38426 CCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| | || || || ||||||| ||| Sbjct 1119 CCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGT 1086 >seq600 Length=9993 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| | || || ||| | | | Sbjct 840 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCTAGC 781 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || || | ||||| |||||||| ||| |||||||| Sbjct 780 GACACCATCGATAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATCCCCCCCGACCAA 721 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||||||||| ||||| || || | || |||||| |||||||||| Sbjct 720 CAGCGATTAATCTTCGCGGGCAAGCAGCTCGAAGATGGTCGAACCCTCTCCGACTACAAC 661 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| || || || | ||||| || Sbjct 660 ATCCAGAAGGAGAGC-ACCCTCCACCTTGTGCTCCG 626 >seq1817 Length=26529 Score = 120 bits (132), Expect = 3e-22 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| ||||||||| | || || ||| | | Sbjct 16581 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATCACCTTAGAGGTTGAGTCGTCA 16640 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| ||||| |||||| |||| | Sbjct 16641 GACACCATCGATAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGATC 16698 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | ||||| || |||||||| |||| || || |||| |||||||| Sbjct 16699 AACAGCGACTTATCTTTGCGGGTAAGCAGCTGGAAGACGGCCGAACTCTCAGCGACTACA 16758 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| |||||| | || || ||| | || || || Sbjct 16759 ACATCCAGAAGGAATCTACCCTCCATCTCGTTCTCCG 16795 Score = 114 bits (126), Expect = 1e-20 Identities = 159/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || || || ||||| | || || || | | Sbjct 16808 AATGCAGATCTTCGTCAAGACCTTGACAGGAAAGACGATCACTCTGGAGGTTGAATCATC 16867 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | || |||| | |||| || |||| ||||| || || |||||| | ||| Sbjct 16868 GGACACGATTGACAACG--TCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 16925 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || || || | ||| || || ||| |||| || | ||||| || | ||||||| Sbjct 16926 CAACAACGACTTATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTAAGCGACTAC 16985 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| |||||||||| |||||||| ||| Sbjct 16986 AACATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGT 17024 Score = 111 bits (122), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| || Sbjct 16059 AACATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCC 16118 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | ||| || || | || || || || ||||| | || Sbjct 16119 TCCGACACCATCGACAACG-TCAAATCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGA 16177 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| | |||| ||| || || || || || || | ||||| || | |||||| Sbjct 16178 CCAGCAGCGATTGATTTTCGCTGGAAAGCAACTTGAGGATGGTCGCACTCTGAGCGACTA 16237 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| |||||| | || || || | || || ||| Sbjct 16238 CAACATCCAGAAGGAATCCACCCTCCACCTCGTCCTTCGT 16277 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38248 AAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA 38307 ||| | |||| || || || || || || ||||||||| |||| || ||| | | |||| Sbjct 16357 AAACAGTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCGGACA 16416 Query 38308 GCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAG 38366 | | |||| |||| || |||| ||||| ||||| || || ||||||||||| Sbjct 16417 CTATCGACAACG-TTAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAACAG 16475 Query 38367 CGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATC 38426 || | |||| ||| ||||| ||||| || || | || ||||| |||||||||||| Sbjct 16476 CGATTGATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATT 16535 Query 38427 CAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| | || || ||| | || || ||| Sbjct 16536 CAGAAGGAGTCTACTCTCCATCTTGTCCTCCGT 16568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160645800960