Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1592 120 2e-21 seq863 87.8 1e-11 >seq1592 Length=100478 Score = 120 bits (132), Expect = 2e-21 Identities = 673/1065 (63%), Gaps = 17/1065 (2%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || ||| |||||| || || | ||||| |||||||| | ||| || ||||| |||||| Sbjct 67905 TTCTCAACGGCAGAGACGTTGATGATACCGTTGGCATCGACATCGAAAGTGACCTCAATT 67846 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 |||||||| || | | ||||||||||| || || | || | || || || Sbjct 67845 TGAGGGACACCACGAGGCGCAGGTGGGATACCGGTCAGCTCGAACTTGCCGAGCAGGTTG 67786 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| || || ||||||||| | | ||||||| || | | || || Sbjct 67785 TTGTCCTTAGTGCGTTGACGCTCACCCTCGTAGACTTGGATAAGCACACCGGGCTGGTTG 67726 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || || | || | || || ||| || || ||||| || ||||||| || Sbjct 67725 TCCGAGAAGGTGGAGAAGACCTCGGACTTCTTGGTGGGAATAGTGGTGTTTCGGGGGATG 67666 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||||| |||||||| || || || | ||| | || || || | ||| || | Sbjct 67665 AGCTTGGTCATCATACCACCAGCAGTCTCGATACCGATGGATAGCGGGGCGACGTCGAGA 67606 Query 517550 AGGACAATAT--TTTGAAGTTTTTCATC-AGTTTGACCAACAAGAATAGCTGCTTGAATA 517606 || | || | || | | || | | || | |||| || ||||| || || | Sbjct 67605 AGCAGGATCTCGTTGGTCGACTTGGAGCTGGTGTCACCAGAGAGGATAGCAGCCTGGACG 67546 Query 517607 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 517666 || ||||| || |||||||| ||||| || || | | || || | | || || ||| Sbjct 67545 GCGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGATTTGTTGGGCTCCTTGCCGTTG 67486 Query 517667 AAAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATAC 517725 || | | | | || | ||| || || ||||||| || || || || || || Sbjct 67485 AAGTAGTCGGTGATGAGCT-TCTGAACACGGGGGATACGAGTGGAACCACCGACCAAGAC 67427 Query 517726 AATTTCATGCACCTGTGATTTATCCAGTTTTGAATC--CAATAAAACTTTTTCAACGGGT 517783 ||| || || || || || || || | || | || ||| | || || ||||| Sbjct 67426 AATCTCGTGGACTTGAGACTTGTCAATCTTGGCGTCGGCAAGGACAC--GGTCGACGGGC 67369 Query 517784 TCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTG 517843 | | | || || | || ||||| || |||||| || | || || | Sbjct 67368 TGGATGGTGGATCGGAAGAGATCCTGGCAAAGCTCCTCGAATCGGGCACGGGT--GATGG 67311 Query 517844 ACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 517901 | | || || ||||| || ||||| | ||| || | ||||| | || |||| |||| Sbjct 67310 AGGTGTAGAAGTCAATACCCTCGAATAGAGAGTCGATCTCAATGGAGGTCTGAGCAGAAG 67251 Query 517902 AAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-- 517959 | || || | || || ||||| || || || || | || | ||| | || || Sbjct 67250 AGGAAAGAGTGCGCTTGGCACGCTCGCAAGCGGTTCGGAGACGTCGCAGAGCACGGGCGT 67191 Query 517960 TGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAG 518019 || | ||| | ||| | || | || | |||||| || | || | | || || Sbjct 67190 TGGTAGAT--AGATCCTTCTTGTGCTTGCGCTTGAACTCGTTCACGAAGTGGTTGACTAG 67133 Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| || || || |||||||| ||||| | ||| | || | |||| | || | ||| Sbjct 67132 ACGGTTGTCGAAGTCTTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTAACCTCGAA 67073 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | || || |||| | | |||| ||||| ||| |||||||| | ||| || || Sbjct 67072 GATACCCTCCTCAATGGTTAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGAT 67013 Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 || || || || || || || |||||||| || || | ||||| || || Sbjct 67012 GAGAACGTTGCGCTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCGATGGCAGCGGCTGT 66953 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 || || || || |||| | || || || |||||||| || || || || || || Sbjct 66952 GGGCTCGTTGATGATTCGGAGGACGTTTAGGCCAGCAATGAGACCGGCGTCCTTGGTAGC 66893 Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||| | || || ||||| || || ||||| ||||| || || || Sbjct 66892 TTGACGCTGAGAGTCGTTGAAGTAGGCAGGTACAGTGATGACAGC 66848 >seq863 Length=70956 Score = 87.8 bits (96), Expect = 1e-11 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| || ||||||||||| | | || || ||||||||||| ||||||||| | || Sbjct 49856 TTAAAGGGAAAAGAAGGTCGGTTACGTGGTAACTTGATGGGAAAGCGTGTCGATTTCTCA 49797 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 || ||||| || || ||| |||| | |||||| | || ||||||| |||||||| Sbjct 49796 GCCCGTACTGTCATCACTGGTGATGCAAATATTTCGCTTGATGAAGTGGGTGTTCC 49741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780725932316464