Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1592 435 4e-117 seq862 199 5e-46 seq1834 118 1e-21 >seq1592 Length=100478 Score = 435 bits (482), Expect = 4e-117 Identities = 1055/1590 (66%), Gaps = 23/1590 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| || || ||||| || || || | || ||| |||||| || || || ||| Sbjct 68016 TCATCTTCCTCCTTGTACTTCTCGGCCTCGTTGAGCATGCGTTCAATTTCCTCCTTGGAT 67957 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | ||| || || | | |||| || | Sbjct 67956 AGACGACCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCAACG 67897 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || || | ||||| || ||||| |||||||| | || | |||||| || | Sbjct 67896 GCAGAGACGTTGATGATACCGTTGGCATCGACATCGAAAGTGACCTCAATTTGAGGGACA 67837 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | ||| ||||| || | || || | || || | |||| ||| | Sbjct 67836 CCACGAGGCGCAGGTGGGATACCGGTCAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTA 67777 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||||| || ||| | || || || || Sbjct 67776 GTGCGTTGACGCTCACCCTCGTAGACTTGGATAAGCACACCGGGCTGGTTGTCCGAGAAG 67717 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | ||||| || || |||| || || | | |||| Sbjct 67716 GTGGAGAAGACCTCGGACTTCTTGGTGGGAATAGTGGTGTTTCGGGGGATGAGCTTGGTC 67657 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| ||| |||| || | || || || | ||||| ||| | |||| Sbjct 67656 ATCATACCACCAGCAGTCTCGATACCGATGGATAGCGGGGCGACGTC---GAGAAGCAGG 67600 Query 6989 ---TC-TTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 || ||| | || | | | |||| | | ||| || || ||||| | || Sbjct 67599 ATCTCGTTGGTCGACTTGGAGCTGGTGTCACCAGAGAGGATAGCAGCCTGGACGGCGGCA 67540 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102 ||||| || || |||||||||||||| || | ||| || | || || ||||| || || Sbjct 67539 CCGTAGGCAACAGCCTCATCGGGGTTGATGGATTTGTTGGGCTCCTTGCCGTTGAAGTAG 67480 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 || | | | | |||| ||||| || || || ||||||||||| || || || Sbjct 67479 TCGGTGATGAGCTTCTGAACACGGGGGATACGAGTGGAACCACCGACCAAGACAATCTCG 67420 Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 | |||| || || || ||||| | ||| ||| ||||| || | || Sbjct 67419 TGGACTTGAGACTTGTCAATCTTGGCGTCGGCAAGGACACGGTCGACGGGCTGGATGGTG 67360 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 ||||| | ||| || || ||||| || || |||||||| ||||| || ||||| Sbjct 67359 GATCGGAAGAGATCCTGGCAAAGCTCCTCGAATCGGGCACGGGTGATGGAGGTGTAGAAG 67300 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTT 7342 |||| || ||| ||| || || || ||||||| || || || | || || | || Sbjct 67299 TCAATACCCTCGAATAGAGAGTCGATCTCAATGGAGGTCTGAGCAGAAGAGGAAAGAGTG 67240 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402 ||||| || ||||| || || ||||| | ||| || || ||||| | ||| || | | Sbjct 67239 CGCTTGGCACGCTCGCAAGCGGTTCGGAGACGTCGCAGAGCACGGGCGTTGGTAGATAGA 67180 Query 7403 TCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461 || ||||| || || || || ||||| |||| |||||| | || | ||||| Sbjct 67179 TCCTTCTTGTGCTTGCGCTTGAACTCGTTCAC-GAAGTGGTTGACTAGACGGTTGTCGAA 67121 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521 ||||||||||||||||| || || || || || | || || || |||||||| | || Sbjct 67120 GTCTTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTAACCTCGAAGATACCCTCCTC 67061 Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581 |||| ||| | || ||||| || ||||||||||| || || || ||||| ||||| Sbjct 67060 AATGGTTAGGAGAGACACATCGAAGGTACCACCACCAAGATCGAAGATGAGAACGTTGCG 67001 Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 || | || ||||| || |||||||| ||||| || || || || || || || || Sbjct 67000 CTCACCCTCGGCCTTCTTGTCAAGACCGTAGGCGATGGCAGCGGCTGTGGGCTCGTTGAT 66941 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || || || ||| ||||||||||| | || || || || ||||| || || || Sbjct 66940 GATTCGGAGGACGTTTAGGCCAGCAATGAGACCGGCGTCCTTGGTAGCTTGACGCTGAGA 66881 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| |||||||| || || || | ||| |||| |||| | ||| || || || Sbjct 66880 GTCGTTGAAGTAGGCAGGTACAGTGATGACAGCGTTGTTGACGGTGCCACCAAGGTAGGA 66821 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || ||| | || ||| ||||| || ||||| || || || ||||| | | ||||| Sbjct 66820 CTCAGCGGTCTCACGCATCTTGGTGAGGACCATAGAGGAGATTTCTTCGGGGGTGAACTG 66761 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCGGGGAT 7878 || || ||||| || | || || |||| || || || || | || || Sbjct 66760 CTTGGTCTCACCCTTGTACTCGACCTCAACAATAGGCTTGCCATTCTTGTCA------AT 66707 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 ||||| | | | | ||||||||| | || |||| |||| || ||||| | || Sbjct 66706 GACCTTGAAGGGGAAGTGCTTCATATCGGCCTGAACCTCAGGGTCTGAGAACTTGCGACC 66647 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 || |||||||| || || || || ||||| | |||||||| || |||||||| || Sbjct 66646 AATCAGACGCTTAGCGTCGAAGACGGTGTTCTGAGGGTTCATAGCGACCTGGTTCTTTGC 66587 Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG 8058 || || || || ||||| || | ||||| || || ||| | || || || ||||| Sbjct 66586 GGCATCACCAATTAGACGCTC---CGTGTCCGTGAAGGCCACGAAGGAGGGTGTGGTTCG 66530 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGA 8118 || || ||||| || ||||| ||||| | ||||| | | | ||||||| || || || Sbjct 66529 GTTACCCTGGTCATTGGCAATGATTTCAATTCGGTCATCTCGGTAGACGCCTACACAAGA 66470 Query 8119 ATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || ||||| |||| ||| Sbjct 66469 GTAGGTCGTGCCCAAGTCAATTCCGACTGC 66440 >seq862 Length=2948 Score = 199 bits (220), Expect = 5e-46 Identities = 362/521 (69%), Gaps = 13/521 (2%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| ||||| |||||||| || ||| | | |||||| |||| ||| | | | Sbjct 1363 CAGGTCCTCGAAACGAGCACGGGTGATCTGGAGGAA--GAAATCCTCGCCATCGAAAAGC 1420 Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || |||||||||||||| ||||| || ||| | || | |||||||| || ||||| | Sbjct 1421 GAGTCAATTTCAATGGTGGTTTGGGCACCGTTG--GACAGGGTTCGCTTAGCACGCTCGC 1478 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | | || || || ||||||| ||| || || || ||||| || | Sbjct 1479 AAGCAGTCCGAAGTCTTCGGAGAGCTCGCGGGTCACCAGAGATGTCCTTCTTGGTCTTGC 1538 Query 7419 GTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | | ||||| ||| | | ||| |||||| | | ||||||||| | ||||| | Sbjct 1539 GCTGGAACTCCTTCTTACAGTGGTC-AAGGAGGTTGGTATCGAAATCCTGTCCACCAAGA 1597 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || ||||| || || || || ||||| || | ||| || | ||||| | | || Sbjct 1598 TGGGTATCACCAGCAGTAGCCTTGACGGTGAAAACACCACCCTGGATGTTAAGAAGAGAC 1657 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGT--ATCGTCGTCTTTG 7594 ||||| || ||||||||||| || ||| | || || || || ||| | || | |||| Sbjct 1658 ACATCGAAAGTACCACCACCAAGATCATAGATAAGGACATTACGTTCCTTGTTGGATTTG 1717 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || | | |||||||| |||||||| || || || ||||| || || ||||| || | Sbjct 1718 TTGGAACCCAGACCGTATGCGATAGCAGCGGCAGTGGGTTCGTTGATGATACGGAGCACG 1777 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 ||||| || | ||| | | ||||| || || || || ||||| ||||| ||||| Sbjct 1778 TTCAGTCCCGAAATGGAACCTGCATCCTTGGTAGCCTGACGTTGGTTGTCGTTGAAGTAA 1837 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || || || || || | | ||| ||||| ||||| Sbjct 1838 GCAGGAACAGTAACAACAGCCTTCTCGACCTTCTTTCCGAG 1878 >seq1834 Length=7267 Score = 118 bits (130), Expect = 1e-21 Identities = 225/328 (69%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || ||||| |||||||||||||| || || || ||||| || ||| || || | ||| Sbjct 6304 TCAAAATCCTCACCACCCAAGTGCGTGTCACCAGCGGTGGCCAAGACCTCGAATACACCA 6363 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | || |||||||| ||||||||||| || || | | || | | Sbjct 6364 TCTTCAATAGACAGAAGGGAGACATCAAAAGTACCACCACCAAGATCGTAGACGATGATG 6423 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || | | | |||| ||||||||||| |||||||| || || || || || Sbjct 6424 TGACGCTCACCACC---GGTCTTGTCGAGACCGTAAGCGATAGCAGCGGCAGTAGGCTCG 6480 Query 7637 TTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||| ||| |||| |||| || || ||||| || | || || || || || |||| Sbjct 6481 TTAACAATTCGAAGGACA-TTGAGACCAGCGATGACACCGGCGTCCTTGGTAGCCTGTCT 6539 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| || ||||| ||||| || ||||| || | || || ||||| || | Sbjct 6540 CTGGTTGTCGTTGAAATAGGCGGGGACAGTAACGACGGCATGTGTAACCTTCTTGCCCAA 6599 Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783 || || || || | || ||||| ||| Sbjct 6600 GTAGGACTCGGCAACCTCCTTCATCTTG 6627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635117366272960