Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq274 172 7e-38 seq1257 131 2e-25 >seq274 Length=11782 Score = 172 bits (190), Expect = 7e-38 Identities = 891/1398 (64%), Gaps = 29/1398 (2%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| |||||| ||||| ||||||| || || | ||||| || || || | || Sbjct 3623 GAAAGGCCACAGCACATGATCATGCGTGTGGCTGTTGGTATTTGGGGCGATAATGTAGAG 3564 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAAC 111724 || | |||| ||| || |||||| | ||| |||| |||||| | || || Sbjct 3563 AAAGTCATTCAGACTTACAACCTTATGTCCAGCAAATAT-TTCACCCACGCTTCCCCCAC 3505 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 || ||||| ||||| ||||| | || || || || ||| | ||| | || Sbjct 3504 TCTTTTCAATGCTGGAACACCCCAGGCACAGCTGGCCTCCTGCTTCTTAGTTGACATGAA 3445 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||| || || | || || |||| ||| |||| |||||| ||||| ||| Sbjct 3444 GGAAGACAGTATTGAGGGTATCTACGACACACTCAAGACCTGTGCCATGATCTCCAAGAC 3385 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 ||||| |||||||| | ||||||| || | || | | ||| || | | Sbjct 3384 AGCTGGAGGTATCGGTCTCAACATCCACCGGATCCGTGCTACT--GGCTCATACATCGCC 3327 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 ||||| |||||| || ||||||| | || ||| | || || || ||| ||| || Sbjct 3326 GGTACGAATGGTACCTCTAATGGTATCGTGCCCATGTTGCGAGTTTTCAACAACACCGCC 3267 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAG 112016 | || || |||| | ||| | |||| || | | || | ||||| || Sbjct 3266 AGATACGTTGACCAGGGTGG---TAACAAGAGGCCCGGTGCCTTTGCTATATATCTCGAA 3210 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || |||||| |||| || | ||||||||||| | || ||||| ||| | || || Sbjct 3209 CCCTGGCACCAGGATGTCTTCGAGTTCCTTGACCTTCGCAAGAACCATGGTAAAGAAGAA 3150 Query 112077 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 112135 | || ||| |||||||| ||| ||||||||||||||| || || ||||||||| | || Sbjct 3149 GTCCG-TGCTCGCGATCTTTTCCTCGCTCTCTGGATTCCTGACCTTTTCATGAAGCGTGT 3091 Query 112136 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGATG 112194 |||| ||| ||| | ||| | ||| | || || || | || || ||||| |||||| Sbjct 3090 TGAGAAGAACGGCGAGTGGACCCTCATGTGCCCTAGTGAGTGC-CCGGGTCTTGCCGATG 3032 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 | ||||| || ||||||||| | ||| ||||| |||| |||| |||| | | | Sbjct 3031 TCTACGGTGATGAATTTGAAGCCTTGTACGAGAAGTATGAGGCAGAAGGTCGTG-GTCGC 2973 Query 112255 C-GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 | || ||| || | | ||| | || ||||| || |||| |||||||| || Sbjct 2972 CAGAAGGTTAAGGCCCAGAAACTATGGTACGCCATTCTGGAGGCTCAGACCGAGACCGGG 2913 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 | || | ||||||||||| || ||| |||| ||||| ||||| ||||| | || Sbjct 2912 AATCCCTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGCAATCAGAAGAACCTTGGA 2853 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 || ||||| ||| | || || || || | || | | | |||||| Sbjct 2852 ACTATTCGTAGTTCTAACTTGTGCACTGAGATTATCGAGTACTCGGCTCCCGATGAGGTA 2793 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--A 112491 || || || ||| | || || | || || || | || || | | | ||| | | Sbjct 2792 GCCGTCTGCAACTTGGCGTCTCTTGCGCTGCCGTCATTCGTTGA-CTACA-CCAACGGTA 2735 Query 112492 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAG 112551 | | ||| | |||| || ||||||||||| | ||||| | ||||| |||||| Sbjct 2734 CCTATGACTTCCAAAAGCTGCACGAAGTTACCCAGGTCGTCACCCACAACCTGAACAGAA 2675 Query 112552 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 ||| ||| || | ||||||||| || || || || ||| | ||||||| Sbjct 2674 CTATCGATGTCAACTACTACCCCGTTCCCGAAGCACGCAACAGCAACATGCGCCACCGTC 2615 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTT 112670 | || ||||| ||||| || ||||| || || ||| | | || || |||| Sbjct 2614 CTATCGGTCTAGGTGTTCAGGGTCTTGCAGACACCTTCCTAGCACTG-CGTATGCCATTC 2556 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || || || | | | || || || || ||||| || || || || ||| Sbjct 2555 GAGTCTCCGGAGGCCAGACAGTTGAACAAGCAGATCTTCGAGACTATTTACCATGCTGCT 2496 Query 112731 CTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || |||| | || |||| || ||| | || || | || |||||| Sbjct 2495 CTAACTGCCTCCGTGGAGATCGCCAAGGTCGAGGGTACCTACTCGACTTACGAAGGTTCT 2436 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTCACTA 112849 || | ||| || || | || |||| || |||| |||| || | || || || || Sbjct 2435 CCTGTTTCTCAGGGTATCCTACAATACGACATGT-GGAATGTCACCCCCAGTGATCTCTG 2377 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 || |||| || ||||| | |||||| | | ||| | || ||||| | || | Sbjct 2376 GGATTGGGCTAGCCTTAAGGAGCAAATCAAGCAACATGGTGTACGAAACAGCTTGTTAGT 2317 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| || || ||| | || || ||||||| || |||||||| || || Sbjct 2316 TGCTCCTATGCCCACTGCTAGCACTTCCCAGATTCTGGGTAACAACGAATGCTTCGAGCC 2257 Query 112970 CTACACGACGAACATCTA 112987 |||||| ||||||| || Sbjct 2256 CTACACATCGAACATTTA 2239 >seq1257 Length=2089 Score = 131 bits (144), Expect = 2e-25 Identities = 158/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 |||||| || |||| ||||| || || |||||| || | ||| | ||| | || || Sbjct 426 AGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCAATGGATCTCTGACAAGAACTC 485 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || ||||| |||| || | || ||||| ||| ||||||||||||||| ||| Sbjct 486 CACTT---TTGCTCAGCGTCTTATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCAGTGG 542 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 | ||| | | |||| ||| | |||||||| ||||| ||||| ||||| |||||| Sbjct 543 CGCATTCGCCTCCATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTC 602 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||||| ||||||||||||||||| || ||| Sbjct 603 CAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620727315959680