Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq274 219 5e-52 >seq274 Length=11782 Score = 219 bits (242), Expect = 5e-52 Identities = 1160/1822 (64%), Gaps = 59/1822 (3%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| ||||| || ||||| |||||| |||||| || | |||||| | Sbjct 1894 CGGAGATAGTACATGCCAGTTTTCAGACCAAGCTTCCAGCCGGTGAAATGCATGCTGGTA 1953 Query 109468 AGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 | || | || || ||||| |||| | ||| | || || || ||||||| || Sbjct 1954 ATCTTCCCCATAGTGGG-CTCTCTCATATGAATGTTTAGTGATTGGGATTGATCGACAAA 2012 Query 109527 TCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583 |||||| ||||| ||||| | ||||| | | || | |||||||| || || Sbjct 2013 GGCACCACGGTCAGCGGCCATCTGGACGATGGTTCGCTGAGAG---ATTTCCCAAACGGT 2069 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643 |||||| | | |||| || | ||||||| ||||| ||||| || ||||| | Sbjct 2070 CTTGTAAAGAGCTTTGAGGTCCGCAGGAATGTTTGGAATGTTCTGAATTGAACCACCTTC 2129 Query 109644 CTTCACCATGAGATCCTTCATCTCTTTC-GACCAGAGACCGACCTTTTTGAGATCGT--- 109699 | ||| | | |||||| || || ||||||||||| | | || || | Sbjct 2130 GGCAATGATGCGGTTCTTCATG-CTGTCAGACCAGAGACCCATGTCAACAAGGTCCTTGA 2188 Query 109700 -CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATG 109758 |||| | | | ||| || || || || |||||||| || || ||| ||| Sbjct 2189 GCAACCA-AGG---GTTAACAACTTGGAACTCGCCAGCAAGGACACGACGAGAGTAAATG 2244 Query 109759 TTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTG 109818 || | |||||||| ||||| || || ||||| || || || || | |||| ||| ||| Sbjct 2245 TTCGATGTGTAGGGCTCGAAGCATTCGTTGTTACCCAGAATCTGGGAAGTGCTAGCAGTG 2304 Query 109819 GGCATGGGAGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCAT 109877 ||||| ||||| | | | ||| |||||||| | ||| | ||| | |||| | | Sbjct 2305 GGCATAGGAGCAACTAACAAG-CTGTTTCGTACACCATGTTGCTTGATTTGCTC-CTTAA 2362 Query 109878 TGCGT-CCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 || ||||||| | || |||| | | || || |||||| || ||| | Sbjct 2363 GGCTAGCCCAATCCCAGAGATCACTGG-----GGGTGAC-ATTCCACATGTCGTATTGTA 2416 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | ||||| || | |||||||||| | | || || ||| | ||||| |||| ||| | Sbjct 2417 GGATACCCTGAGAAACAGGAGAACCTTCGTAAGTCGAGTAGGTACCCTCGACCTTGGCGA 2476 Query 109997 ACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGA 110056 ||| || || ||| || ||||| || |||||||| || || || |||| Sbjct 2477 TCTCCACGGAGGCAGTTAGAGCAGCATGGTAAATAGTCTCGAAGATCTGCTTGTTCAACT 2536 Query 110057 GGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGCTAGACCC 110115 | | | ||| | | ||||| || | || || | | || || || |||||| Sbjct 2537 GTCTGGCCTCCGGAGACTCGAATGGCATACG-CAGTGCTAGGAAGGTGTCTGCAAGACCC 2595 Query 110116 TGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT---ACG 110172 |||||||| ||||| || || || || |||||| | || || ||| ||| Sbjct 2596 TGAACACCTAGACCGATAGGACGGTGGCGCATGTTGCTGTTGCGTGC---TTCGGGAACG 2652 Query 110173 GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCA 110232 ||||| ||||| ||||| | || || || | || || || || | ||| Sbjct 2653 GGGTAGTAGTTGACATCGATAGTTCTGTTCAGGTTGTGGGTGACGACCTGGGTAACTTCG 2712 Query 110233 TGGAGTTTGTCGTAATCGAACGTT---TTCGTCTCCTTATTGACATATTTGGGGAGAGCA 110289 || || || | | | || | || || || | | | || || || || ||| Sbjct 2713 TGCAGCTTTTGGAAGTCATAGGTACCGTTGGTGTAGTCAACGA---ATGACGGCAGCGCA 2769 Query 110290 ATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTA 110349 | |||||| | ||||| || | ||| || | | ||| || | ||| || || Sbjct 2770 AGAGACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCAGTG 2829 Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 |||||||| ||||| ||| || | |||||||||||| ||| |||||| | Sbjct 2830 CACAAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAGTGA 2889 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCAT 110469 ||||| || |||||| | || | || || || ||||| | || |||||||| | |||| Sbjct 2890 TCCTTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTACCAT 2949 Query 110470 ACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAG 110529 | | ||| || | | | | ||||||| |||| ||||| ||||||| Sbjct 2950 AGTTTCTGGGCCTTAACCTTCTGGCGACCACGACCTTCTGCCTCATACTTCTCGTACAAG 3009 Query 110530 TCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGG 110589 | |||||||| | ||||| ||||| | ||||||| || || || | |||| Sbjct 3010 GCTTCAAATTCATCACCGTAGACATCGGCAAGACCCGGGCACTCACTAGGGCACATGAGG 3069 Query 110590 GACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAG 110649 | ||| | || || |||||| | ||||||||| |||||||||||||| | || | Sbjct 3070 GTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGG 3129 Query 110650 AAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCC 110709 ||||| || || ||| | ||||| | ||| ||||| ||| || || | || || Sbjct 3130 AAAAGATCGCGAGCACGGACTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGGAACTCG 3189 Query 110710 ATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGA 110763 | || |||| |||||| ||||||||||| | ||| | || || ||| || | Sbjct 3190 AAGACATCCTGGTGCCAGGGTTCGAGATATATAGCAAAGGCACCGGGCCTCTTGTTACCA 3249 Query 110764 CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCA 110823 | |||||| ||| || | || ||| ||||| || | | ||| || | || ||| Sbjct 3250 C---CCTGGTCAACGTATCTGGCGGTGTTGTTGAAAACTCGCAACATGGGCACGATACCA 3306 Query 110824 TCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGC 110883 | || |||||| ||||| || || | | ||||| || |||||| | Sbjct 3307 TTAGAGGTACCATTCGTACCGGCGATGTATGAGCCAGTAGCACGGATCCGGTGGATGTTG 3366 Query 110884 ATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAAT 110942 | ||| ||||| || || ||| || ||||| ||| ||||||| | || || Sbjct 3367 AGACCGATACCTCCAGCTGTCTTGGAGATCATGGCACAGGTCT-TGAGTGTGTCGTAGAT 3425 Query 110943 ACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGG 111002 ||| ||||| ||| |||| || ||| || ||||| || | || ||| | | || Sbjct 3426 ACCCTCAATACTGTCTTCCTTCATGTCAACTAAGAAGCAGGAGGCCAGCTGTGCCTGGGG 3485 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTG 111060 ||||| |||||||| || || || | || || |||| | | ||| |||||| | Sbjct 3486 TGTTCCAGCATTGAAAAGAGTGGGGGAAGCGTGGGTGAA-ATA-TTTGCTGGACATAAGG 3543 Query 111061 TTGTATGTGTCGAGTG-CGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 ||||| || | || || | ||||| | || |||||||| || || ||||| Sbjct 3544 TTGTAAGTCT-GAATGACTTTCTCTACATTATCGCCCCAAATACCAACAGCCACACGCAT 3602 Query 111120 GAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTC 111179 || ||| | || ||| |||| | | ||| ||| | | | |||||| | |||| Sbjct 3603 GATCATGTGCTGTGGCCTTTCTACAATCTTCTCATTGAGCTTCAGTAGGTAAGACCTCTC 3662 Query 111180 TAGGGTCTTGAGACCAAAGTAT 111201 | |||||||| ||||||||| Sbjct 3663 CAAGGTCTTGAAGCCAAAGTAT 3684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961687883200