Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daldinia_20eschscholtzii_20[genbank_20GCA_5F000751375.1_202014-09- 06] 1,944 sequences; 35,539,942 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq274 154 2e-32 seq1257 105 8e-18 >seq274 Length=11782 Score = 154 bits (170), Expect = 2e-32 Identities = 311/452 (69%), Gaps = 12/452 (3%) Strand=Plus/Plus Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || ||||| ||||| || || |||||| | | | |||||| | ||| || || ||| Sbjct 2773 GACGCCAAGTTGCAGACGGCTACCTCATCGGGAGCCGAGTACTCGATAATCTCAGTGCAC 2832 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 ||||| ||||| ||| || || | ||||| || || ||||| |||||| |||| Sbjct 2833 AAGTTAGAACTACGAATAGTTCCAAGGTTCTTCTGATTGCTCTTGCGGTTGCAGTGATCC 2892 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648 ||||| |||||| |||| |||| ||||| ||||| | || ||||| || | ||| | Sbjct 2893 TTGTAAAGCATGAAGGGATTCCCGGTCTCGGTCTGAGCCTCCAGAATGGCGTACCATAGT 2952 Query 106649 TCGGCGGCTGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 106706 | ||| || | |||| | || || || ||||| ||||| ||| | || Sbjct 2953 TTCTGGGCCTTAACCTTCTGGCGAC--CACGACCTTCTGCCTCATACTTCTCGTACAAGG 3010 Query 106707 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGA 106765 ||||||| || ||||| | |||| ||||| || || | || || || | || Sbjct 3011 CTTCAAATTCATCACCGTAGACATCGGCAAGACCCGG-GCACTCACTAGGGCACATGAGG 3069 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC--ACAGGGATG 106823 | ||| | || || |||||| ||||||||||||||||| ||||||| | || || | Sbjct 3070 GTCCACTCGCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGAATCCAGAGAGCGAGG 3129 Query 106824 AAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 106882 ||| ||||| | | ||| || | ||||| | ||| ||||| || | ||||||||| Sbjct 3130 AAA--AGATCGCGAGCACGGA-CTTCTTCTTTACCATGGTTCTTGCGAAGGTCAAGGAAC 3186 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATA 106914 || | || |||| |||||| || || ||||| Sbjct 3187 TCGAAGACATCCTGGTGCCAGGGTTCGAGATA 3218 >seq1257 Length=2089 Score = 105 bits (116), Expect = 8e-18 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| || || || || || || || |||||| || || ||||| ||||| Sbjct 636 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACC 577 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||||||| |||| | | ||||| || ||||||||||||||| ||| Sbjct 576 ACGCTTCTTCAACCAGAAAATGGAGGCGAATGCGCCACTGAAGAAGATACCCTCGACAGC 517 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461 ||||| |||| ||| |||| || || | | || || ||||| | ||||| || Sbjct 516 AGCAAAGGCAATAAGACGCTGAGCAAAAGTG---GAGTTCTTGTCAGAGATCCATTGCAG 460 Query 117462 TGCCCATTTCGCCTTCTT 117479 ||||| | |||||||| Sbjct 459 AGCCCAGTCGGCCTTCTT 442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966463466560